RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NFIL3Q16649 462 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 RNF207Q6ZRF8 634 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 SYCP3Q8IZU3 236 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 PLEKHO2Q8TD55 490 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 KCNQ5Q9NR82 932 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 USP15Q9Y4E8 981 aaPredicted RBP12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 SPOPO43791 374 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 ANP32DO95626 131 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 NDUFB10O96000 172 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 HADHBP55084 474 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 SLC47A2Q86VL8 602 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 ATG4AQ8WYN0 398 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 TMEM109Q9BVC6 243 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 NUP85Q9BW27 656 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 NSRP1Q9H0G5 558 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 EBF2Q9HAK2 575 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 KCNK9Q9NPC2 374 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
PDZRN3-203ENST00000462146 SERPINB2P05120 415 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CETPP11597 493 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 PDE6CP51160 858 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 PPP2R5AQ15172 486 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF568Q3ZCX4 644 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 SYDE2Q5VT97 1194 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CGB2Q6NT52 195 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 TAOK1Q7L7X3 1001 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 DAW1Q8N136 415 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF564Q8TBZ8 553 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 MKL1Q969V6 931 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 SH2D3AQ9BRG2 576 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CBWD1Q9BRT8 395 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 HERPUD2Q9BSE4 406 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 TBK1Q9UHD2 729 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 PSMD10O75832 226 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CFBP00751 764 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 MMP14P50281 582 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 KRT17Q04695 432 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 GALNTL6Q49A17 601 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 MIGA2Q7L4E1 593 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 FITM2Q8N6M3 262 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 EPS8L1Q8TE68 723 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 CHST7Q9NS84 486 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
PDZRN3-203ENST00000462146 K7ENM7 598 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 DDX39AO00148 427 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 CYP26A1O43174 497 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 HIP1RO75146 1068 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 BCRP11274 1271 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 HSPA6P17066 643 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 VPS41P49754 854 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF131P52739 623 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 MGAT5Q09328 741 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 NYAP2Q9P242 653 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 C15orf41Q9Y2V0 281 aa12.58□□□□□ -0.39
PDZRN3-203ENST00000462146 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 LY75O60449 1722 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 CFAP73A6NFT4 308 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 RTN2O75298 545 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ECEL1O95672 775 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 KYNUQ16719 465 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 PHLDB2Q86SQ0 1253 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 PRUNE1Q86TP1 453 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 FAXDC2Q96IV6 333 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 TUFT1Q9NNX1 390 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 PKD2L1Q9P0L9 805 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 RIPK1Q13546 671 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 CYFIP1Q7L576 1253 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ERICH1Q86X53 443 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ZNF653Q96CK0 615 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 KREMEN1Q96MU8 473 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ZNF570Q96NI8 536 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
PDZRN3-203ENST00000462146 ASIC3Q9UHC3 531 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms