RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TRAPPC10P48553 1259 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 GLUD2P49448 558 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 TMEM132AQ24JP5 1023 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 CDCA2Q69YH5 1023 aaPredicted RBP23.28■■□□□ 1.32
VSX1-206ENST00000444511 PADI6Q6TGC4 694 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 PPP4R3CPQ6ZMV5 832 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 TAS1R1Q7RTX1 841 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 ASIC4Q96FT7 647 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 RPS6KC1Q96S38 1066 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 C2orf40Q9H1Z8 148 aa23.28■■□□□ 1.32
VSX1-206ENST00000444511 ADH1AP07327 375 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 CYP11B2P19099 503 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 NHLH1Q02575 133 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 GRIK3Q13003 919 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 MTMR3Q13615 1198 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 GPR149Q86SP6 731 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 FZD8Q9H461 694 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 KLK14Q9P0G3 267 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 SORCS3Q9UPU3 1222 aa23.27■■□□□ 1.32
VSX1-206ENST00000444511 F8W810 466 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
VSX1-206ENST00000444511 MUTP22033 750 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 CCT6AP40227 531 aaKnown RBP23.26■■□□□ 1.31
VSX1-206ENST00000444511 FAM187BQ17R55 369 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 ZDHHC14Q8IZN3 488 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 PLCD3Q8N3E9 789 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 GSTCDQ8NEC7 633 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 DEPTORQ8TB45 409 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 KIF2CQ99661 725 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 USTQ9Y2C2 406 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 TRIOO75962 3097 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 ZMYM2Q9UBW7 1377 aa23.26■■□□□ 1.31
VSX1-206ENST00000444511 N4BP3O15049 544 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 TEX28O15482 410 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 LIG1P18858 919 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 NAMPTP43490 491 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 FXR2P51116 673 aaKnown RBP eCLIP23.25■■□□□ 1.31
VSX1-206ENST00000444511 PRPF4BQ13523 1007 aaKnown RBP23.25■■□□□ 1.31
VSX1-206ENST00000444511 NBR1Q14596 966 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 MAPK6Q16659 721 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 KIAA0319Q5VV43 1072 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 ELMSAN1Q6PJG2 1045 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 CCDC149Q6ZUS6 474 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 UBALD2Q8IYN6 164 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 RNF168Q8IYW5 571 aaPredicted RBP23.25■■□□□ 1.31
VSX1-206ENST00000444511 BSNDQ8WZ55 320 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 MAN1C1Q9NR34 630 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 LRWD1Q9UFC0 647 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 DPP7Q9UHL4 492 aa23.25■■□□□ 1.31
VSX1-206ENST00000444511 EFEMP2O95967 443 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 PRKCBP05771 671 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 DSG1Q02413 1049 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 PPP2R5AQ15172 486 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 FUT10Q6P4F1 479 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 C15orf39Q6ZRI6 1047 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 ALYREFQ86V81 257 aaKnown RBP23.24■■□□□ 1.31
VSX1-206ENST00000444511 FEZF2Q8TBJ5 459 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 ACSF2Q96CM8 615 aaPredicted RBP23.24■■□□□ 1.31
VSX1-206ENST00000444511 PDZD7Q9H5P4 517 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 RXFP1Q9HBX9 757 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 LIMD1Q9UGP4 676 aa23.24■■□□□ 1.31
VSX1-206ENST00000444511 BRD1O95696 1058 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 GLUD1P00367 558 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 ASGR2P07307 311 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 IER5LQ5T953 404 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 C4orf32Q8N8J7 132 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 IFT74Q96LB3 600 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 PRRX2Q99811 253 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 ADPGKQ9BRR6 497 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 RAB34Q9BZG1 259 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 BHMT2Q9H2M3 363 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 CHST7Q9NS84 486 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 ADAM28Q9UKQ2 775 aa23.23■■□□□ 1.31
VSX1-206ENST00000444511 ZNF318Q5VUA4 2279 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 TTLL13PA6NNM8 815 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 ACKR2O00590 384 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 TADA2AO75478 443 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 U2AF2P26368 475 aaKnown RBP eCLIP23.22■■□□□ 1.31
VSX1-206ENST00000444511 ECM1Q16610 540 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 USP41Q3LFD5 358 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 C8orf34Q49A92 452 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 OTOP3Q7RTS5 596 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 PRSS33Q8NF86 280 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 RABGGTAQ92696 567 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 B3GALT6Q96L58 329 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 GPR62Q9BZJ7 368 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 CCDC113Q9H0I3 377 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.22■■□□□ 1.31
VSX1-206ENST00000444511 KIAA1024Q9UPX6 916 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 STK24Q9Y6E0 443 aa23.22■■□□□ 1.31
VSX1-206ENST00000444511 PTPN5P54829 565 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 PTGDRQ13258 359 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 TUSC3Q13454 348 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 PDIA5Q14554 519 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 HSP90AA2PQ14568 343 aaPredicted RBP23.21■■□□□ 1.31
VSX1-206ENST00000444511 CMASQ8NFW8 434 aaPredicted RBP23.21■■□□□ 1.31
VSX1-206ENST00000444511 SNX29Q8TEQ0 813 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 RIN2Q8WYP3 895 aaPredicted RBP23.21■■□□□ 1.31
VSX1-206ENST00000444511 KIFAP3Q92845 792 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 DDX19AQ9NUU7 478 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms