RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 STC2O76061 302 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 ENDOD1O94919 500 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 GASTP01350 101 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 VCAM1P19320 739 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 ECHS1P30084 290 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 CRHR1P34998 444 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 WASP42768 502 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 NPEPPSP55786 919 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 ODF1Q14990 250 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 FAM111BQ6SJ93 734 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 CMTR2Q8IYT2 770 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 CPA6Q8N4T0 437 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 LILRA3Q8N6C8 439 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 JDP2Q8WYK2 163 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 ADOQ96SZ5 270 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 TCF25Q9BQ70 676 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 CSRNP2Q9H175 543 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 DMRT3Q9NQL9 472 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 KLHL42Q9P2K6 505 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 NCDNQ9UBB6 729 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 TUBD1Q9UJT1 453 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 DNM3Q9UQ16 869 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 THRAP3Q9Y2W1 955 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 TSC22D4Q9Y3Q8 395 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 TCAF1Q9Y4C2 921 aa4.85□□□□□ -1.63
TRAPPC13-204ENST00000438419 AKAP10O43572 662 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 ABLIM3O94929 683 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 CT47B1P0C2W7 299 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 GSPT1P15170 499 aaKnown RBP4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 CASRP41180 1078 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 KIF23Q02241 960 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 PPP3CAQ08209 521 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 PDZD4Q76G19 769 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 PALM2Q8IXS6 379 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 MIER2Q8N344 545 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 D2HGDHQ8N465 521 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 PPM1NQ8N819 430 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 NUP88Q99567 741 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 GPRC5DQ9NZD1 345 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 TCEAL9Q9UHQ7 104 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 TESMINQ9Y4I5 508 aa4.84□□□□□ -1.63
TRAPPC13-204ENST00000438419 MUSKO15146 869 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ITGA10O75578 1167 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZRANB2O95218 330 aaKnown RBP eCLIP4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 IL33O95760 270 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 RAB27AP51159 221 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 NOMO1Q15155 1222 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 HS1BP3Q53T59 392 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 MIGA2Q7L4E1 593 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 OR7D4Q8NG98 312 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 OR5M3Q8NGP4 307 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 NRG4Q8WWG1 115 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 HOXB13Q92826 284 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ARL8AQ96BM9 186 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 HSPBAP1Q96EW2 488 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 MPHOSPH9Q99550 1183 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 CDH19Q9H159 772 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 IP6K2Q9UHH9 426 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZNF180Q9UJW8 692 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 G3BP2Q9UN86 482 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 EID1Q9Y6B2 187 aa4.83□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZSCAN20P17040 1043 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 ADSLP30566 484 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 GZMKP49863 264 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 PER3P56645 1201 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 PRKD1Q15139 912 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 FAM214AQ32MH5 1076 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 SPDYAQ5MJ70 313 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 MFSD5Q6N075 450 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 HDAC10Q969S8 669 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 COA7Q96BR5 231 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 CYFIP2Q96F07 1278 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 IL17RAQ96F46 866 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 FAM89AQ96GI7 184 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 ZNF512Q96ME7 567 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 UHRF1Q96T88 793 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 GPR20Q99678 358 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 C7orf25Q9BPX7 421 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 RHOBTB2Q9BYZ6 727 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 MANSC1Q9H8J5 431 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 TRPS1Q9UHF7 1281 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 INTUQ9ULD6 942 aa4.82□□□□□ -1.64
TRAPPC13-204ENST00000438419 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 MARCH6O60337 910 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 DTNBO60941 627 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 RFPL1O75677 317 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 PF4V1P10720 104 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 INSRRP14616 1297 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 AKAP5P24588 427 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 MRPL49Q13405 166 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 SEPT2Q15019 361 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 PPP2R5AQ15172 486 aa4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 NFE2Q16621 373 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-204ENST00000438419 FKBP15Q5T1M5 1219 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms