RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 RSPH14Q9UHP6 348 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 ACAD8Q9UKU7 415 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 DNM3Q9UQ16 869 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 GPR52Q9Y2T5 361 aa5.07□□□□□ -1.6
SF3B1-202ENST00000409915 RBM8AQ9Y5S9 174 aaKnown RBP5.07□□□□□ -1.6
SF3B1-202ENST00000409915 CENPFP49454 3210 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 A0A1B0GVC2 190 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FAM170AA1A519 330 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CDC14CA4D256 554 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FAM86C2PA6NEL3 165 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 A6NNZ2 444 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 B4E1Z4 1266 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 C19orf81C9J6K1 198 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 K7ESF4 209 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 M0R3H8 397 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ZNF213O14771 459 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TPP1O14773 563 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TLR2O60603 784 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TMCC2O75069 709 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FKTNO75072 461 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CPP00450 1065 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CYP21A2P08686 494 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ACRP10323 421 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 BCRP11274 1271 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CAPN3P20807 821 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CTGFP29279 349 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 STT3AP46977 705 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 PLA2G4AP47712 749 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 GRIA4P48058 902 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CLK1P49759 484 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 IL2P60568 153 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ERVK-21P61565 698 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 HERVK_113P62684 666 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 PPP2R2AP63151 447 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 SLC7A5Q01650 507 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 SP3Q02447 781 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 PRKG2Q13237 762 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ODF1Q14990 250 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 RNFT1Q5M7Z0 435 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 IFIT1BQ5T764 474 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CDCA2Q69YH5 1023 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FAAH2Q6GMR7 532 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TMEM214Q6NUQ4 689 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 C17orf99Q6UX52 265 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 MFSD6Q6ZSS7 791 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 STOX1Q6ZVD7 989 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 UBE2R2Q712K3 238 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 BTLAQ7Z6A9 289 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CCDC91Q7Z6B0 441 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TBC1D1Q86TI0 1168 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 HSCBQ8IWL3 235 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 NDUFAF2Q8N183 169 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FAM26EQ8N5C1 309 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 MYCT1Q8N699 235 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 IQUBQ8NA54 791 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 NEDD1Q8NHV4 660 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 NSUN6Q8TEA1 469 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 RHBDD1Q8TEB9 315 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 NUP133Q8WUM0 1156 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 PIBF1Q8WXW3 757 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 C12orf42Q96LP6 360 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ZSCAN10Q96SZ4 725 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 P2RX7Q99572 595 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 SEZ6LQ9BYH1 1024 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 VCPKMTQ9H867 229 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TXNRD2Q9NNW7 524 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
SF3B1-202ENST00000409915 SMYD2Q9NRG4 433 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FBXO28Q9NVF7 368 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 MTMR4Q9NYA4 1195 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 CLIP2Q9UDT6 1046 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 FBXO10Q9UK96 956 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 STX8Q9UNK0 236 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 TRIM17Q9Y577 477 aa5.06□□□□□ -1.6
SF3B1-202ENST00000409915 ITIH6Q6UXX5 1313 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 LRRC10BA6NIK2 292 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 MEN1O00255 615 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 SLC27A2O14975 620 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 PRODHO43272 600 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 PQBP1O60828 265 aaKnown RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 CNMDO75829 334 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 FLOT1O75955 427 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 TTLL1O95922 423 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 NDUFB10O96000 172 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 PYGLP06737 847 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 MYBP10242 640 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 TAL1P17542 331 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 ITPKAP23677 461 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 GRNP28799 593 aaKnown RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 OAS2P29728 719 aaKnown RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 TSPAN7P41732 249 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 TNNT3P45378 269 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 APBA1Q02410 837 aa5.05□□□□□ -1.6
SF3B1-202ENST00000409915 RPL6Q02878 288 aaKnown RBP5.05□□□□□ -1.6
SF3B1-202ENST00000409915 FAAP100Q0VG06 881 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms