RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 STILQ15468 1287 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 TRIP13Q15645 432 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 SNRNP35Q16560 246 aaKnown RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 SPOPLQ6IQ16 392 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 PCGF5Q86SE9 256 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 TXNRD3Q86VQ6 643 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 DEPDC1BQ8WUY9 529 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 N4BP2L2Q92802 583 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 FAF2Q96CS3 445 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 RAB3IPQ96QF0 476 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GOLPH3LQ9H4A5 285 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 STARD7Q9NQZ5 370 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ABCF3Q9NUQ8 709 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 CDC23Q9UJX2 597 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 SALL1Q9NSC2 1324 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GOLGA8QA0A0J9YX86 632 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GOLGA8OA6NCC3 632 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 CCDC160A6NGH7 325 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 MIF4GDA9UHW6 222 aaKnown RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GOLGA8NF8WBI6 632 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 MNAT1P51948 309 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 PLTPP55058 493 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ZNF235Q14590 738 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ARHGAP15Q53QZ3 475 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 FMR1NBQ8N0W7 255 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 NUF2Q9BZD4 464 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 VCXQ9H320 206 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ENTPD7Q9NQZ7 604 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 RGPD8O14715 1765 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 DDTLA6NHG4 134 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 CHGBP05060 677 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 KRT3P12035 628 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 HOXA10P31260 410 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 SGSM1Q2NKQ1 1148 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 JADE1Q6IE81 842 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 C3orf67Q6ZVT6 689 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GLYCTKQ8IVS8 523 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 C10orf67Q8IYJ2 551 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ZNF564Q8TBZ8 553 aaPredicted RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 PARP4Q9UKK3 1724 aaKnown RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 LRRC53A6NM62 1247 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ITPRIPL1Q6GPH6 555 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 SEPT8Q92599 483 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 YME1L1Q96TA2 773 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 EPAS1Q99814 870 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 TRIM17Q9Y577 477 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 COL14A1Q05707 1796 aaKnown RBP5.3□□□□□ -1.56
HDAC9-204ENST00000406451 GPC4O75487 556 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ODC1P11926 461 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ANTXR2P58335 489 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 ST8SIA6P61647 398 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 DR1Q01658 176 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 FKBP1CQ5VVH2 108 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 KCTD17Q8N5Z5 321 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 OGFRQ9NZT2 677 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 PCSK1NQ9UHG2 260 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 NRBP1Q9UHY1 535 aa5.3□□□□□ -1.56
HDAC9-204ENST00000406451 FAM205CA6NFA0 338 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 STRNO43815 780 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 ZNF189O75820 626 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 LRG1P02750 347 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 TMTC4Q5T4D3 741 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 CENPUQ71F23 418 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 TTC30BQ8N4P2 665 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 BPIFA3Q9BQP9 254 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 COLEC11Q9BWP8 271 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 ASCC2Q9H1I8 757 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 DHX35Q9H5Z1 703 aaKnown RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 GPRC5DQ9NZD1 345 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 BAG5Q9UL15 447 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 DIS3Q9Y2L1 958 aaKnown RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 PRG3Q9Y2Y8 225 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 SH3BP1Q9Y3L3 701 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 KCNA4P22459 653 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 HSD17B4P51659 736 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 TAF1BQ53T94 588 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 TRIM42Q8IWZ5 723 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 LRRC8CQ8TDW0 803 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 MED15Q96RN5 788 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 FBXO2Q9UK22 296 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 PCDHB8Q9UN66 801 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 DFFAO00273 331 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 TRPA1O75762 1119 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 FGGP02679 453 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 RAG1P15918 1043 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 PAPOLAP51003 745 aaKnown RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 SNRPFP62306 86 aaKnown RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 SATB1Q01826 763 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 DACT2Q5SW24 774 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 PGBD3Q8N328 593 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 EFHBQ8N7U6 833 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 HVCN1Q96D96 273 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 PLEKHA5Q9HAU0 1116 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 DDX56Q9NY93 547 aaKnown RBP5.29□□□□□ -1.56
HDAC9-204ENST00000406451 KLHL14Q9P2G3 628 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 SLC4A7Q9Y6M7 1214 aa5.29□□□□□ -1.56
HDAC9-204ENST00000406451 GOLGA8KD6RF30 607 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms