RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IFI35P80217 286 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 ZNF746Q6NUN9 644 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 RPUSD2Q8IZ73 545 aaKnown RBP19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 ZKSCAN4Q969J2 545 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 HAUS2Q9NVX0 235 aa19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 CHORDC1Q9UHD1 332 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-202ENST00000394633 SMIM23A6NLE4 172 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 MMEP08473 750 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 ALAS1P13196 640 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 PEX5P50542 639 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 GSCP56915 257 aaPredicted RBP19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 GPC5P78333 572 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 IRX3P78415 501 aaPredicted RBP19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 PPP3CAQ08209 521 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 FUKQ8N0W3 1084 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 PCIF1Q9H4Z3 704 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 GPRC5DQ9NZD1 345 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 HERC5Q9UII4 1024 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 HACL1Q9UJ83 578 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 TISP43B9A030 160 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 ATP2C2O75185 946 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 DDNO94850 711 aaPredicted RBP19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 ARP10275 920 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 COMTP21964 271 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 GPC2Q8N158 579 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 P3H4Q92791 437 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 TEPSINQ96N21 525 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 PCDHB18PQ96TA0 734 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 KDM4CQ9H3R0 1056 aa19.74■□□□□ 0.75
PCDHA1-202ENST00000394633 PODXLO00592 558 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 RGS16O15492 202 aaPredicted RBP19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 GHRP10912 638 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 MYBPC2Q14324 1141 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 MESDQ14696 234 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 EPC2Q52LR7 807 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 CYB5D1Q6P9G0 228 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 CCDC137Q6PK04 289 aaKnown RBP19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 RPS6KC1Q96S38 1066 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 LXNQ9BS40 222 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 ZNF577Q9BSK1 485 aa19.73■□□□□ 0.75
PCDHA1-202ENST00000394633 TCRBV7S2A1N4TA0A589 114 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 ARHGEF35A5YM69 484 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 ANKRD63C9JTQ0 380 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 POLR2MP0CAP2 368 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 STAT2P52630 851 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CEP55Q53EZ4 464 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 C1orf220Q5T0J3 134 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 B3GNT9Q6UX72 402 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CPNE8Q86YQ8 564 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CCDC197Q8NCU1 140 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 UHMK1Q8TAS1 419 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 KAT5Q92993 513 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 WDR11Q9BZH6 1224 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 GEMIN8Q9NWZ8 242 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 K7ENM7 598 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 ATMINO43313 823 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 RTN2O75298 545 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 GGPS1O95749 300 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 PYGMP11217 842 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CHRNB2P17787 502 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 ECE1P42892 770 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 VAMP7P51809 220 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 ADCY2Q08462 1091 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 C6orf118Q5T5N4 469 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 SEL1L2Q5TEA6 688 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CCDC174Q6PII3 467 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 INTS8Q75QN2 995 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 EPS8L3Q8TE67 593 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 CD101Q93033 1021 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 MTRF1LQ9UGC7 380 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 PARP2Q9UGN5 583 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 TRPC6Q9Y210 931 aa19.72■□□□□ 0.75
PCDHA1-202ENST00000394633 SGPL1O95470 568 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 AGTP01019 485 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 FGFR4P22455 802 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 GBP1P32455 592 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 GCLMP48507 274 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 HIRAP54198 1017 aaPredicted RBP19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 XRCC4Q13426 336 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 MAEAQ7L5Y9 396 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 PARP9Q8IXQ6 854 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 SGSM3Q96HU1 749 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 MYCBPQ99417 103 aaPredicted RBP19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 TMEM109Q9BVC6 243 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 CCT8L1PA6NM43 557 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 RIPK2O43353 540 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 DNAJC8O75937 253 aaPredicted RBP19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 MTA2O94776 668 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 CYP1B1Q16678 543 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 C9orf131Q5VYM1 1079 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 PIGWQ7Z7B1 504 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 NOP9Q86U38 636 aaKnown RBP19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 LRRC34Q8IZ02 419 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 ZSWIM2Q8NEG5 633 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 VTI1AQ96AJ9 217 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 TEKT3Q9BXF9 490 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 WNT8AQ9H1J5 351 aa19.71■□□□□ 0.75
PCDHA1-202ENST00000394633 POLR2AP24928 1970 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms