RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 MIEF2Q96C03 454 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 NAP1L3Q99457 506 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 SAE1Q9UBE0 346 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 CRKP46108 304 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 JAM2P57087 298 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 CETN1Q12798 172 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 SPOPLQ6IQ16 392 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 DPY19L2P1Q6NXN4 242 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 RUBCNQ92622 972 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 ERP27Q96DN0 273 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 ZSWIM1Q9BR11 485 aa17.93■□□□□ 0.46
SIPA1-201ENST00000394224 NSRP1Q9H0G5 558 aaKnown RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 TMX4Q9H1E5 349 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-201ENST00000394224 CBX6O95503 412 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 CETPP11597 493 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 MAPK4P31152 587 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 MXI1P50539 228 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 VAMP7P51809 220 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 C6orf118Q5T5N4 469 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 PADI6Q6TGC4 694 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 ZNF720Q7Z2F6 126 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 PITPNM3Q9BZ71 974 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 LRRC4BQ9NT99 713 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 YTHDF3Q7Z739 585 aaKnown RBP17.92■□□□□ 0.46
SIPA1-201ENST00000394224 POMGNT1Q8WZA1 660 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 C11orf70Q9BRQ4 267 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 CNOT10Q9H9A5 744 aaKnown RBP17.92■□□□□ 0.46
SIPA1-201ENST00000394224 HOMER3Q9NSC5 361 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 NKIRAS1Q9NYS0 192 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 ANAPC5Q9UJX4 755 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 ITGB4P16144 1822 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 PPIP5K2O43314 1243 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 COBLL1Q53SF7 1204 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 TAOK1Q7L7X3 1001 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 CARD9Q9H257 536 aa17.92■□□□□ 0.46
SIPA1-201ENST00000394224 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
SIPA1-201ENST00000394224 USP15Q9Y4E8 981 aaPredicted RBP17.92■□□□□ 0.46
SIPA1-201ENST00000394224 PASKQ96RG2 1323 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 KAT6AQ92794 2004 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 SUN1O94901 812 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 EYA4O95677 639 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 PCK1P35558 622 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 NOP14P78316 857 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 MDH1BQ5I0G3 518 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 ISLR2Q6UXK2 745 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 GPR88Q9GZN0 384 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 UNC45AQ9H3U1 944 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 POU5F1Q01860 360 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 DRP2Q13474 957 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 INTS8Q75QN2 995 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 SLC13A5Q86YT5 568 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 DTX3LQ8TDB6 740 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 LRRN4Q8WUT4 740 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 GLIS2Q9BZE0 524 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 PRR12Q9ULL5 1215 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 EIF3BP55884 814 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 APOBEC3HQ6NTF7 200 aaKnown RBP17.91■□□□□ 0.46
SIPA1-201ENST00000394224 KLHL14Q9P2G3 628 aa17.91■□□□□ 0.46
SIPA1-201ENST00000394224 C2orf71A6NGG8 1288 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SNX3O60493 162 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 PRKCIP41743 596 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 PDE6CP51160 858 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 GABPAQ06546 454 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 GNPTABQ3T906 1256 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SPATA21Q7Z572 469 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 RASGEF1CQ8N431 466 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SEMA4DQ92854 862 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 TLCD1Q96CP7 247 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 A0A1B0GUL6 1792 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 PPEF1O14829 653 aaPredicted RBP17.9■□□□□ 0.46
SIPA1-201ENST00000394224 NQO1P15559 274 aaKnown RBP17.9■□□□□ 0.46
SIPA1-201ENST00000394224 MMP13P45452 471 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 NCALDP61601 193 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 DDR1Q08345 913 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 ADCY2Q08462 1091 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SLFN11Q7Z7L1 901 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 IPO5O00410 1097 aaKnown RBP17.9■□□□□ 0.46
SIPA1-201ENST00000394224 CFHP08603 1231 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 RALAP11233 206 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 ATF2P15336 505 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SLC8A1P32418 973 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 FASTKD3Q14CZ7 662 aaKnown RBP17.9■□□□□ 0.46
SIPA1-201ENST00000394224 TAF11Q15544 211 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 CYFIP1Q7L576 1253 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 MIER3Q7Z3K6 550 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 AGBL1Q96MI9 1066 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 TRIM6Q9C030 488 aaPredicted RBP17.9■□□□□ 0.46
SIPA1-201ENST00000394224 ZCWPW1Q9H0M4 648 aa17.9■□□□□ 0.46
SIPA1-201ENST00000394224 SAYSD1Q9NPB0 183 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms