RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 YBX2Q9Y2T7 364 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 SNCAIPQ9Y6H5 919 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 ABCC4O15439 1325 aa3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 EDC4Q6P2E9 1401 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-205ENST00000368295 EPOPA6NHQ4 379 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 F5H423 210 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 WNT10BO00744 389 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 GARTP22102 1010 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PAPOLAP51003 745 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 AK2P54819 239 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 C21orf62-AS1Q17RA5 79 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 GPR158Q5T848 1215 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 LCE4AQ5TA78 99 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 DYMQ7RTS9 669 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 CATSPER4Q7RTX7 472 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 HDXQ7Z353 690 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 GALNT5Q7Z7M9 940 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 SDCCAG8Q86SQ7 713 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 MYLK4Q86YV6 388 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 C2CD4AQ8NCU7 369 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 UTP4Q969X6 686 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 WDR89Q96FK6 387 aaPredicted RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 CRAMP1Q96RY5 1269 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 NUDT16L1Q9BRJ7 211 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 LSM14BQ9BX40 385 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 NT5C1AQ9BXI3 368 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 CERS4Q9HA82 394 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PIDD1Q9HB75 910 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PICK1Q9NRD5 415 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 TMEM51Q9NW97 253 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 HOXC10Q9NYD6 342 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 ACTR10Q9NZ32 417 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 CRIM1Q9NZV1 1036 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 ADAMTS1Q9UHI8 967 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 MUTYHQ9UIF7 546 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 TMX2Q9Y320 296 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 RRP15Q9Y3B9 282 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PCDHGC5Q9Y5F6 944 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 LRRFIP2Q9Y608 721 aaKnown RBP3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 TACC3Q9Y6A5 838 aa3.96□□□□□ -1.77
ECHDC1-205ENST00000368295 PLXNA1Q9UIW2 1896 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 CNOT1A5YKK6 2376 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PROB1E7EW31 1015 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 H0Y3Z8 333 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 TLR5O60602 858 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 USP2O75604 605 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MBD4O95243 580 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MYOGP15173 224 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 HOXD12P35452 270 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MAPK9P45984 424 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 ERVK-24P63145 666 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 RPL6Q02878 288 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PABPC4Q13310 644 aaKnown RBP eCLIP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MPP2Q14168 576 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PLCB4Q15147 1175 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 FXNQ16595 210 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 LONRF2Q1L5Z9 754 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 WIPI1Q5MNZ9 446 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 ARMC4Q5T2S8 1044 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 NBPF12Q5TAG4 269 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 VPS53Q5VIR6 699 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 AGAP9Q5VTM2 703 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 CDCA2Q69YH5 1023 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM180BQ6P0A1 224 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 LDHAL6AQ6ZMR3 332 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 FASTKD5Q7L8L6 764 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 DZIP1LQ8IYY4 767 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 TAB3Q8N5C8 712 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 GOLM1Q8NBJ4 401 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 KCT2Q8NC54 265 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 GATAD2BQ8WXI9 593 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 HERVK_113Q902F9 699 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 SHDQ96IW2 340 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 ZMAT2Q96NC0 199 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MYD88Q99836 296 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 EIF2AK1Q9BQI3 630 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 SSBP4Q9BWG4 385 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 LRRC3Q9BY71 257 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PLEKHA5Q9HAU0 1116 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 ST7Q9NRC1 585 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PDP2Q9P2J9 529 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 POLLQ9UGP5 575 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 TBK1Q9UHD2 729 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PCSK1NQ9UHG2 260 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PPP1R9AQ9ULJ8 1098 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 PCDHAC2Q9Y5I4 1007 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 ACTL7BQ9Y614 415 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 MTCH2Q9Y6C9 303 aa3.96□□□□□ -1.78
ECHDC1-205ENST00000368295 DNAJC25-GNG10A0A024R161 153 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 hCG_1642624A0A1W2PR95 340 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 ANKRD18BA2A2Z9 1011 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 ERICH4A6NGS2 130 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 DCDC2CA8MYV0 355 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 CILPO75339 1184 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 F13A1P00488 732 aa3.95□□□□□ -1.78
ECHDC1-205ENST00000368295 LAMB1P07942 1786 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms