RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 APBB1IPQ7Z5R6 666 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 CDR2LQ86X02 465 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 RNF149Q8NC42 400 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 BBOF1Q8ND07 529 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PSPC1Q8WXF1 523 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 RNF34Q969K3 372 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 HEXIM2Q96MH2 286 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ELAC2Q9BQ52 826 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TRIM7Q9C029 511 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 FAM49AQ9H0Q0 323 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 WNT8AQ9H1J5 351 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 KIAA1586Q9HCI6 787 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 OLFML3Q9NRN5 406 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 GGA3Q9NZ52 723 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 AIPL1Q9NZN9 384 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TTLL3Q9Y4R7 772 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PFASO15067 1338 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 MYBL2P10244 700 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PRLRP16471 622 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PSMA2P25787 234 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 IRAK1P51617 712 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PPP2R2AP63151 447 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 DGKZQ13574 1117 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF699Q32M78 642 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ARSHQ5FYA8 562 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 XKR3Q5GH77 459 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 DPY19L2Q6NUT2 758 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TARS2Q9BW92 718 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TBX20Q9UMR3 447 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 BAZ2AQ9UIF9 1905 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 EXOC1LA0A1B0GW35 172 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 WNT10BO00744 389 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF263O14978 683 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SPATA31C1P0DKV0 1188 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SNHG28P0DPA3 235 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 CBWD6Q4V339 395 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 CBWD3Q5JTY5 395 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 CBWD5Q5RIA9 395 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 AGBL3Q8NEM8 1001 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 HSPH1Q92598 858 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 FAM149B1Q96BN6 582 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 MAD1L1Q9Y6D9 718 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF142P52746 1687 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.963e-9■□□□□ 10.2
PTPRK-206ENST00000368215 GGPS1O95749 300 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 VCAM1P19320 739 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 NPTX2P47972 431 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 STAT5BP51692 787 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 LMNB2Q03252 620 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 ZNF667Q5HYK9 610 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SPATS2Q86XZ4 545 aaKnown RBP9.04□□□□□ -0.96
PTPRK-206ENST00000368215 JAMLQ86YT9 394 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 KCTD6Q8NC69 237 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TMEM35BQ8NCS4 154 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 P3H4Q92791 437 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TMEM117Q9H0C3 514 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 SCINQ9Y6U3 715 aa9.04□□□□□ -0.96
PTPRK-206ENST00000368215 TRPM3Q9HCF6 1732 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 WDR91A4D1P6 747 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 HLA-DRAP01903 254 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 FAM153BP0C7A2 387 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ANXA13P27216 316 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 RARRES1P49788 294 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 AMPD2Q01433 879 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 KRT17Q04695 432 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ADCY2Q08462 1091 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 EMC2Q15006 297 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 FAM153CQ494X1 144 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 NUGGCQ68CJ6 796 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 NLRP14Q86W24 1093 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ETNPPLQ8TBG4 499 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 TSNARE1Q96NA8 513 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 JPH2Q9BR39 696 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ISCUQ9H1K1 167 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 FAM153AQ9UHL3 310 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 ALS2Q96Q42 1657 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 PPP1R37O75864 691 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 MMS22LQ6ZRQ5 1243 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 TAS1R2Q8TE23 839 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 TACO1Q9BSH4 297 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 CNOT10Q9H9A5 744 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 NGRNQ9NPE2 291 aaKnown RBP9.03□□□□□ -0.96
PTPRK-206ENST00000368215 FDX1P10109 184 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 CIITAP33076 1130 aa9.03□□□□□ -0.96
PTPRK-206ENST00000368215 PHBP35232 272 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms