RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 PRG3Q9Y2Y8 225 aaPredicted RBP19.64■□□□□ 0.73
CKLF-202ENST00000345436 HES2Q9Y543 173 aa19.64■□□□□ 0.73
CKLF-202ENST00000345436 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.73
CKLF-202ENST00000345436 B4GALT5O43286 388 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 PRKCBP05771 671 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 ADH1AP07327 375 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 SCNN1GP51170 649 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 AFF1P51825 1210 aaKnown RBP19.63■□□□□ 0.73
CKLF-202ENST00000345436 CREMQ03060 361 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 GRIK3Q13003 919 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 PTPN14Q15678 1187 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 ZBTB33Q86T24 672 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 AUTS2Q8WXX7 1259 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 TIPINQ9BVW5 301 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 NXF3Q9H4D5 531 aaKnown RBP19.63■□□□□ 0.73
CKLF-202ENST00000345436 C11orf16Q9NQ32 467 aa19.63■□□□□ 0.73
CKLF-202ENST00000345436 K7ERI5 159 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 TADA2AO75478 443 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 SSBP05455 408 aaKnown RBP eCLIP19.62■□□□□ 0.73
CKLF-202ENST00000345436 LIG1P18858 919 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 AKAP5P24588 427 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 TOB1P50616 345 aaPredicted RBP19.62■□□□□ 0.73
CKLF-202ENST00000345436 DSC1Q08554 894 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 GPR65Q8IYL9 337 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 DRC1Q96MC2 740 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 ZFP42Q96MM3 310 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 HERC2P3Q9BVR0 1158 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 NT5C3AQ9H0P0 336 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 SFXN1Q9H9B4 322 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 TSHZ2Q9NRE2 1034 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
CKLF-202ENST00000345436 ATG2AQ2TAZ0 1938 aa19.62■□□□□ 0.73
CKLF-202ENST00000345436 C1RP00736 705 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 GJB2P29033 226 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 GLUD2P49448 558 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 NBR1Q14596 966 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 RARS2Q5T160 578 aaKnown RBP19.61■□□□□ 0.73
CKLF-202ENST00000345436 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 SLC22A17Q8WUG5 538 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 BCL7CQ8WUZ0 217 aaPredicted RBP19.61■□□□□ 0.73
CKLF-202ENST00000345436 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 FBXL18Q96ME1 805 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 KLHL5Q96PQ7 755 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 KCNH6Q9H252 994 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 C17orf75Q9HAS0 396 aa19.61■□□□□ 0.73
CKLF-202ENST00000345436 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.61■□□□□ 0.73
CKLF-202ENST00000345436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.61■□□□□ 0.73
CKLF-202ENST00000345436 CCDC169A6NNP5 214 aa19.6■□□□□ 0.73
CKLF-202ENST00000345436 THP07101 528 aa19.6■□□□□ 0.73
CKLF-202ENST00000345436 CNPP09543 421 aaKnown RBP19.6■□□□□ 0.73
CKLF-202ENST00000345436 DMP1Q13316 513 aaPredicted RBP19.6■□□□□ 0.73
CKLF-202ENST00000345436 USP41Q3LFD5 358 aa19.6■□□□□ 0.73
CKLF-202ENST00000345436 ARL6IP4Q66PJ3 421 aaKnown RBP19.6■□□□□ 0.73
CKLF-202ENST00000345436 CYP26C1Q6V0L0 522 aa19.6■□□□□ 0.73
CKLF-202ENST00000345436 CDR2LQ86X02 465 aaPredicted RBP19.6■□□□□ 0.73
CKLF-202ENST00000345436 MIOSQ9NXC5 875 aa19.6■□□□□ 0.73
CKLF-202ENST00000345436 C2CD2LO14523 706 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 BMP15O95972 392 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 EPCAMP16422 314 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 PLA2G5P39877 138 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 ZXDAP98168 799 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 ELAVL2Q12926 359 aaKnown RBP19.59■□□□□ 0.73
CKLF-202ENST00000345436 TUSC3Q13454 348 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 LARP1BQ659C4 914 aaKnown RBP19.59■□□□□ 0.73
CKLF-202ENST00000345436 TRIM67Q6ZTA4 783 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 ACSF2Q96CM8 615 aaPredicted RBP19.59■□□□□ 0.73
CKLF-202ENST00000345436 PDZD7Q9H5P4 517 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 RAPGEFL1Q9UHV5 662 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 ADAM28Q9UKQ2 775 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 USTQ9Y2C2 406 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 ARID2Q68CP9 1835 aa19.59■□□□□ 0.73
CKLF-202ENST00000345436 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.73
CKLF-202ENST00000345436 SLC26A4O43511 780 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 B4GALT3O60512 393 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 LILRB3O75022 631 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 GLUD1P00367 558 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 CLCN4P51793 760 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 SMTNP53814 917 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 YARSP54577 528 aaKnown RBP19.58■□□□□ 0.72
CKLF-202ENST00000345436 ATP2C1P98194 919 aaPredicted RBP19.58■□□□□ 0.72
CKLF-202ENST00000345436 DSG1Q02413 1049 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.72
CKLF-202ENST00000345436 ATF7IP2Q5U623 682 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 PDXDC1Q6P996 788 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 BMP8AQ7Z5Y6 402 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 HDAC7Q8WUI4 952 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 BSNDQ8WZ55 320 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 VN1R3Q9BXE9 311 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 CCDC113Q9H0I3 377 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 TMEM134Q9H6X4 195 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 SNTG2Q9NY99 539 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 KCND2Q9NZV8 630 aa19.58■□□□□ 0.72
CKLF-202ENST00000345436 TMEM221A6NGB7 291 aa19.57■□□□□ 0.72
CKLF-202ENST00000345436 M0R296 226 aa19.57■□□□□ 0.72
CKLF-202ENST00000345436 PDCP20941 246 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms