RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
HDGFL3-201ENST00000299633 MMTAG2Q9BU76 263 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-201ENST00000299633 UFL1O94874 794 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 DNAJC3Q13217 504 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 MCM8Q9UJA3 840 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 USP1O94782 785 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 BBS7Q8IWZ6 715 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 COG1Q8WTW3 980 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 FAF2Q96CS3 445 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 PANX2Q96RD6 677 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 C6orf62Q9GZU0 229 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 TJP3O95049 919 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ARL4CP56559 192 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 NUP107P57740 925 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ARF3P61204 181 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 KDSRQ06136 332 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 MXD4Q14582 209 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 POLD4Q9HCU8 107 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ALBP02768 609 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 MFAP3P55082 362 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 SVILO95425 2214 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 KLHL38Q2WGJ6 581 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 LAYNQ6UX15 382 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 CMTM5Q96DZ9 223 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 MIA3Q5JRA6 1907 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ULK4Q96C45 1275 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 CCSER2Q9H7U1 834 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 FNDC3AQ9Y2H6 1198 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 CLIC4Q9Y696 253 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 PTPRTO14522 1441 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 BCL2L14Q9BZR8 327 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 RABGAP1LQ5R372 815 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 SAYSD1Q9NPB0 183 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 K7ENM7 598 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 ERFP50548 548 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 C17orf80Q9BSJ5 609 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 DOPEY2Q9Y3R5 2298 aa11.79□□□□□ -0.52
HDGFL3-201ENST00000299633 H0YCG3 227 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 BPIFB4P59827 614 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 EXOSC10Q01780 885 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 FBXO42Q6P3S6 717 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CNDP1Q96KN2 507 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 FAM81BQ96LP2 452 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CHL1O00533 1208 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 HSPA2P54652 639 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 FAPQ12884 760 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 R3HDM2Q9Y2K5 976 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 GNB5O14775 395 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 KRT38O76015 456 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 GNPATO15228 680 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 IP6K1Q92551 441 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CEP44Q9C0F1 390 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 ARHGEF10LQ9HCE6 1279 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 TRIM43BA6NCK2 446 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 TNFRSF21O75509 655 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 DDIASQ8IXT1 998 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CCNYQ8ND76 341 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 NOL6Q9H6R4 1146 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 ZMYM3Q14202 1370 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 MAGEA13PA6NCF6 341 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 P4HA2O15460 535 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 PTGS2P35354 604 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 FASTKD1Q53R41 847 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 CAPSLQ8WWF8 208 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 FRMD6Q96NE9 622 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 AP1M1Q9BXS5 423 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 HMG20AQ9NP66 347 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 VHLP40337 213 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 RIN3Q8TB24 985 aa11.78□□□□□ -0.52
HDGFL3-201ENST00000299633 GRAMD1AQ96CP6 724 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms