RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 SNRNP35Q16560 246 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 SLC8A2Q9UPR5 921 aa18.31■□□□□ 0.52
CDCP1-201ENST00000296129 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
CDCP1-201ENST00000296129 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 LRRC31Q6UY01 552 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 CRLF3Q8IUI8 442 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SLC30A5Q8TAD4 765 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 CHMP6Q96FZ7 201 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SLITRK6Q9H5Y7 841 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 MAPK13O15264 365 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 E4F1Q66K89 784 aaPredicted RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SPDL1Q96EA4 605 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 KLHL11Q9NVR0 708 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 USH1CQ9Y6N9 552 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 A0A0G2JND7 137 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 KIAA0391O15091 583 aaKnown RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 CTIFO43310 598 aaKnown RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SCP2P22307 547 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 KLK7P49862 253 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 PDIA2Q13087 525 aaKnown RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 IFT43Q96FT9 208 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 ZNF560Q96MR9 790 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 ACTR5Q9H9F9 607 aaPredicted RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 A0A087WUV0 522 aaPredicted RBP18.3■□□□□ 0.52
CDCP1-201ENST00000296129 UCHL3P15374 230 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 PRKCEQ02156 737 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 TAP1Q03518 808 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 CPA5Q8WXQ8 436 aa18.3■□□□□ 0.52
CDCP1-201ENST00000296129 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 KRT38O76015 456 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 ESRRAP11474 423 aaPredicted RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 ZBED8Q8IZ13 594 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 PPWD1Q96BP3 646 aaKnown RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 MS4A14Q96JA4 679 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 BCAR1P56945 870 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 E2F5Q15329 346 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 WDR72Q3MJ13 1102 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 PI4K2BG5E9Z4 385 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 ART3Q13508 389 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 VPS39Q96JC1 886 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 DONSONQ9NYP3 566 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 FHOD1Q9Y613 1164 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 NVLO15381 856 aaKnown RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 TAC1P20366 129 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 PPP4CP60510 307 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 KRT17Q04695 432 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 FAM47EQ6ZV65 393 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 SPATA4Q8NEY3 305 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 TRIM10Q9UDY6 481 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 CFLARO15519 480 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 CDH6P55285 790 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 TMTC4Q5T4D3 741 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 MOV10L1Q9BXT6 1211 aaKnown RBP18.29■□□□□ 0.52
CDCP1-201ENST00000296129 MLXIPLQ9NP71 852 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 AMACRQ9UHK6 382 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 SNX12Q9UMY4 172 aa18.29■□□□□ 0.52
CDCP1-201ENST00000296129 MOCS2O96007 188 aaPredicted RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 CDKL3Q8IVW4 592 aaPredicted RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 CPSF2Q9P2I0 782 aaKnown RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 POLLQ9UGP5 575 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 ADAM21Q9UKJ8 722 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 RASGRP2Q7LDG7 609 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 GBP7Q8N8V2 638 aaPredicted RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 HAUS8Q9BT25 410 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 SMARCAD1Q9H4L7 1026 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 GSTA4O15217 222 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 LUC7L3O95232 432 aaKnown RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 YWHAHQ04917 246 aaPredicted RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 SLC10A5Q5PT55 438 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 RASSF3Q86WH2 238 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 SEPT1Q8WYJ6 367 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 AGAP1Q9UPQ3 857 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 SLC37A4O43826 429 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 BEND6Q5SZJ8 279 aaPredicted RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 PPM1NQ8N819 430 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 PDCD6IPQ8WUM4 868 aaKnown RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 VPS11Q9H270 941 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 PPLO60437 1756 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 TNPO2O14787 897 aaKnown RBP18.28■□□□□ 0.52
CDCP1-201ENST00000296129 TROAPQ12815 778 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 NR1H3Q13133 447 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 INTUQ9ULD6 942 aa18.28■□□□□ 0.52
CDCP1-201ENST00000296129 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 CCDC195A0A1B0GUA6 201 aa18.27■□□□□ 0.52
CDCP1-201ENST00000296129 RPSAP08865 295 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 PAPOLAP51003 745 aaKnown RBP18.27■□□□□ 0.52
CDCP1-201ENST00000296129 NSUN2Q08J23 767 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms