RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SLC1A1P43005 524 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 MAPK7Q13164 816 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 MMS22LQ6ZRQ5 1243 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 SYDE1Q6ZW31 735 aaPredicted RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 LENG9Q96B70 501 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 ANAPC5Q9UJX4 755 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 ATRNL1Q5VV63 1379 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 AGPSO00116 658 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 DGAT1O75907 488 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 MTERF2Q49AM1 385 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 CBWD6Q4V339 395 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 CBWD3Q5JTY5 395 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 CBWD5Q5RIA9 395 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 FAM160B1Q5W0V3 765 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 C1orf131Q8NDD1 294 aaKnown RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 PAIP2Q9BPZ3 127 aaKnown RBP10.77□□□□□ -0.69
HMGCR-201ENST00000287936 LCMT1Q9UIC8 334 aa10.77□□□□□ -0.69
HMGCR-201ENST00000287936 COL4A1P02462 1669 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 IGLV3-22A0A075B6J6 115 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 SRRM3A6NNA2 597 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 AGTP01019 485 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 EZRP15311 586 aaKnown RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 ATP2A2P16615 1042 aaKnown RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 GTF2H1P32780 548 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 RARRES1P49788 294 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 SNX1Q13596 522 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 ZBTB8OSQ8IWT0 167 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 IQCKQ8N0W5 287 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 HES6Q96HZ4 224 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 CBWD1Q9BRT8 395 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 AGTPBP1Q9UPW5 1226 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 NKRFO15226 690 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■■■■□ 24.3
HMGCR-201ENST00000287936 STX2P32856 288 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 ZNF131P52739 623 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 CCDC91Q7Z6B0 441 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 RASGEF1CQ8N431 466 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 FAM213AQ9BRX8 229 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 MOV10L1Q9BXT6 1211 aaKnown RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 IKBKGQ9Y6K9 419 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 MMEP08473 750 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 ITGA4P13612 1032 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 FOXR1Q6PIV2 292 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 SLC30A10Q6XR72 485 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 DNAAF5Q86Y56 855 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 RPAP3Q9H6T3 665 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 PPP1R9AQ9ULJ8 1098 aa10.76□□□□□ -0.69
HMGCR-201ENST00000287936 TTC7AQ9ULT0 858 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-201ENST00000287936 RXRBP28702 533 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 FNTAP49354 379 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SETDB1Q15047 1291 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ZNF677Q86XU0 584 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 CCDC89Q8N998 374 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TRIM7Q9C029 511 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ANKFY1Q9P2R3 1169 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TULP2O00295 520 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TBC1D12O60347 775 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SCP2P22307 547 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 VPS41P49754 854 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 CDR2Q01850 454 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TRMT10CQ7L0Y3 403 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 CHMP6Q96FZ7 201 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TAAR1Q96RJ0 339 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 K7ERI5 159 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ZBTB39O15060 712 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TBXAS1P24557 533 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SNRNP48Q6IEG0 339 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TMC3Q7Z5M5 1100 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SLC13A5Q86YT5 568 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 C12orf56Q8IXR9 622 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ANKRD42Q8N9B4 389 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SLC20A1Q8WUM9 679 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 POLR3FQ9H1D9 316 aaPredicted RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SIX2Q9NPC8 291 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ADAM22Q9P0K1 906 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 CNGA1P29973 690 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 POLR2BP30876 1174 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SLCO1A2P46721 670 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SURF1Q15526 300 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 SWSAP1Q6NVH7 229 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 ANKRD35Q8N283 1001 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
HMGCR-201ENST00000287936 MGARPQ8TDB4 240 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms