RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 SLC35G2Q8TBE7 412 aa18.24■□□□□ 0.51
TRPC1-201ENST00000273482 DUSP9Q99956 384 aaKnown RBP18.24■□□□□ 0.51
TRPC1-201ENST00000273482 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
TRPC1-201ENST00000273482 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
TRPC1-201ENST00000273482 REXO2Q9Y3B8 237 aaKnown RBP18.24■□□□□ 0.51
TRPC1-201ENST00000273482 GAKO14976 1311 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 NR3C2P08235 984 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 TFAMQ00059 246 aaKnown RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 CENPPQ6IPU0 288 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 FRMD5Q7Z6J6 570 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 ZC3H18Q86VM9 953 aaKnown RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 SESTD1Q86VW0 696 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 SYN2Q92777 582 aaPredicted RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 SPC25Q9HBM1 224 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 STOML1Q9UBI4 398 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 JAK3P52333 1124 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 PDGFDQ9GZP0 370 aaPredicted RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 ESRRAP11474 423 aaPredicted RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 COPB2P35606 906 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 CRYMQ14894 314 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 JAMLQ86YT9 394 aa18.23■□□□□ 0.51
TRPC1-201ENST00000273482 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
TRPC1-201ENST00000273482 SCP2P22307 547 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 GCLMP48507 274 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
TRPC1-201ENST00000273482 HEMGNQ9BXL5 484 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 A0A0G2JND7 137 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 TRIM49P0CI25 452 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 TRIM49CP0CI26 452 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 SOX5P35711 763 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 PIK3CAP42336 1068 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 NAGPAQ9UK23 515 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 SGK1O00141 431 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 IRX1P78414 480 aaPredicted RBP18.22■□□□□ 0.51
TRPC1-201ENST00000273482 LONRF1Q17RB8 773 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 SPATA20Q8TB22 786 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 EPHA7Q15375 998 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 SHROOM1Q2M3G4 852 aaPredicted RBP18.22■□□□□ 0.51
TRPC1-201ENST00000273482 TRIM59Q8IWR1 403 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 THNSL1Q8IYQ7 743 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 SAYSD1Q9NPB0 183 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 ANAPC7Q9UJX3 599 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
TRPC1-201ENST00000273482 DENND3A2RUS2 1198 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 IGF2BP3O00425 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 MAP3K7O43318 606 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 SWT1Q5T5J6 900 aaKnown RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 TEX2Q8IWB9 1127 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 TAAR1Q96RJ0 339 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 IDI2Q9BXS1 227 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 VCX3AQ9NNX9 186 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 PCDHA10Q9Y5I2 948 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 USH1CQ9Y6N9 552 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 ZNF142P52746 1687 aaPredicted RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 M0QZ92 97 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 INHBAP08476 426 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 CCND1P24385 295 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 CYP2W1Q8TAV3 490 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 C1orf54Q8WWF1 131 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 COL14A1Q05707 1796 aaKnown RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 GYG2O15488 501 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 YWHAGP61981 247 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 MKRN4PQ13434 485 aaPredicted RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 ZNF384Q8TF68 577 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 NXF1Q9UBU9 619 aaKnown RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 CNOT8Q9UFF9 292 aaKnown RBP18.21■□□□□ 0.51
TRPC1-201ENST00000273482 DCTN4Q9UJW0 460 aa18.21■□□□□ 0.51
TRPC1-201ENST00000273482 EYA4O95677 639 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 PSMC5P62195 406 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 DAGLBQ8NCG7 672 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 CAND2O75155 1236 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 TNNC2P02585 160 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 TPCN2Q8NHX9 752 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 PABPC3Q9H361 631 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 PARP4Q9UKK3 1724 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 TMEM120BA0PK00 339 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 YARSP54577 528 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 SPDYE2Q495Y8 402 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 MEI1Q5TIA1 1274 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 NKX2-3Q8TAU0 364 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 ZNF507Q8TCN5 953 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 KCNH7Q9NS40 1196 aa18.2■□□□□ 0.5
TRPC1-201ENST00000273482 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
TRPC1-201ENST00000273482 MSH4O15457 936 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 ANP32DO95626 131 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 FDX1P10109 184 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 ANKRD20A8PQ5CZ79 823 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
TRPC1-201ENST00000273482 CASC4Q6P4E1 433 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms