RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 FSHRP23945 695 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 MCM2P49736 904 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 DSG1Q02413 1049 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 UBXN2BQ14CS0 331 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 PHLDB3Q6NSJ2 640 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 PRSS55Q6UWB4 352 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-201ENST00000242776 PARM1Q6UWI2 310 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 CDR2LQ86X02 465 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-201ENST00000242776 HASPINQ8TF76 798 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 FGF14Q92915 247 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-201ENST00000242776 RXFP1Q9HBX9 757 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 KLK14Q9P0G3 267 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 DDX25Q9UHL0 483 aaKnown RBP15.37■□□□□ 0.05
DDX39A-201ENST00000242776 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 MTF2Q9Y483 593 aaPredicted RBP15.37■□□□□ 0.05
DDX39A-201ENST00000242776 CACNA1BQ00975 2339 aa15.37■□□□□ 0.05
DDX39A-201ENST00000242776 SLC37A4O43826 429 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
DDX39A-201ENST00000242776 AKAP5P24588 427 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 QARSP47897 775 aaKnown RBP15.36■□□□□ 0.05
DDX39A-201ENST00000242776 CSTF1Q05048 431 aaKnown RBP15.36■□□□□ 0.05
DDX39A-201ENST00000242776 NTRK3Q16288 839 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 FUT10Q6P4F1 479 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 B3GNT9Q6UX72 402 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 MAML2Q8IZL2 1156 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-201ENST00000242776 ETNPPLQ8TBG4 499 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 NXPE3Q969Y0 559 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
DDX39A-201ENST00000242776 AGXT2Q9BYV1 514 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 PRKD2Q9BZL6 878 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.36■□□□□ 0.051e-6■■■■□ 20.4
DDX39A-201ENST00000242776 PCDHA4Q9UN74 947 aa15.36■□□□□ 0.05
DDX39A-201ENST00000242776 ANHXE9PGG2 379 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 ZBTB39O15060 712 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 TSPAN1O60635 241 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 NR1I2O75469 434 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 EMC2Q15006 297 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 INF2Q27J81 1249 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 CYP26C1Q6V0L0 522 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 CEP57Q86XR8 500 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 RNF168Q8IYW5 571 aaPredicted RBP15.35■□□□□ 0.05
DDX39A-201ENST00000242776 SUMF1Q8NBK3 374 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
DDX39A-201ENST00000242776 TRIM6Q9C030 488 aaPredicted RBP15.35■□□□□ 0.05
DDX39A-201ENST00000242776 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
DDX39A-201ENST00000242776 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 UBN1Q9NPG3 1134 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 SPTBN2O15020 2390 aa15.35■□□□□ 0.05
DDX39A-201ENST00000242776 CCL16O15467 120 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 LAMTOR5O43504 91 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 DSC1Q08554 894 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
DDX39A-201ENST00000242776 USP41Q3LFD5 358 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 XKR9Q5GH70 373 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 TSSK4Q6SA08 328 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 BLIDQ8IZY5 108 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 KXD1Q9BQD3 176 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 SLC2A4RGQ9NR83 387 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 ZDHHC7Q9NXF8 308 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 DLL3Q9NYJ7 618 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 RGL1Q9NZL6 768 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 GPR179Q6PRD1 2367 aa15.34■□□□□ 0.05
DDX39A-201ENST00000242776 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 DTNBO60941 627 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 TADA2AO75478 443 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 ZMYND10O75800 440 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 EFEMP2O95967 443 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 IFNAR1P17181 557 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 CYP3A7P24462 503 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 CYP4A11Q02928 519 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 SSRP1Q08945 709 aaKnown RBP15.33■□□□□ 0.05
DDX39A-201ENST00000242776 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.05
DDX39A-201ENST00000242776 VARS2Q5ST30 1063 aaKnown RBP15.33■□□□□ 0.05
DDX39A-201ENST00000242776 NCAPH2Q6IBW4 605 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 NOTUMQ6P988 496 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 CNNM3Q8NE01 707 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 DYDC2Q96IM9 177 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 SHDQ96IW2 340 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 PAAF1Q9BRP4 392 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 BCO2Q9BYV7 579 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 DHX33Q9H6R0 707 aaKnown RBP15.33■□□□□ 0.05
DDX39A-201ENST00000242776 CHST7Q9NS84 486 aa15.33■□□□□ 0.05
DDX39A-201ENST00000242776 KANSL1LA0AUZ9 987 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 FAM170BA6NMN3 283 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 B4GALT5O43286 388 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 MARCH6O60337 910 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 NPTXRO95502 500 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 PDIA3P30101 505 aaKnown RBP15.33■□□□□ 0.04
DDX39A-201ENST00000242776 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
DDX39A-201ENST00000242776 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.04
DDX39A-201ENST00000242776 RFC5P40937 340 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 STARD6P59095 220 aa15.33■□□□□ 0.04
DDX39A-201ENST00000242776 MLF2Q15773 248 aaPredicted RBP15.33■□□□□ 0.04
DDX39A-201ENST00000242776 RTP2Q5QGT7 225 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms