RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TNS2Q63HR2 1409 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 NPHP3-ACAD11A0A0J9YXS1 232 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 SSU72P8A0A1W2PR75 194 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 GOLGA8MH3BSY2 632 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 MAPK13O15264 365 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 KRT10P13645 584 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 NCF2P19878 526 aaPredicted RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 CIITAP33076 1130 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 MTMR2Q13614 643 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 SLC18A3Q16572 532 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 XKR3Q5GH77 459 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CDKAL1Q5VV42 579 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 FAM47EQ6ZV65 393 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 UBN1Q9NPG3 1134 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 FAM187AA6NFU0 413 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 STXBP3O00186 592 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 PMS2P54278 862 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 HNRNPH2P55795 449 aaKnown RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 SLC12A1Q13621 1099 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 THEM5Q8N1Q8 247 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 DHX38Q92620 1227 aaKnown RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 REEP2Q9BRK0 252 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 AGPAT5Q9NUQ2 364 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 NOC2LQ9Y3T9 749 aaKnown RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 FOXP2O15409 715 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CYP26A1O43174 497 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 BNIP3LO60238 219 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CSPG5O95196 566 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CASP2P42575 452 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 NR1H3Q13133 447 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 LMBRD2Q68DH5 695 aaPredicted RBP12.24□□□□□ -0.45
NOD1-201ENST00000222823 DAGLBQ8NCG7 672 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 TTC25Q96NG3 672 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 AGPAT1Q99943 283 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 CYP26B1Q9NR63 512 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 AMACRQ9UHK6 382 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 SNX12Q9UMY4 172 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 ABCC6O95255 1503 aa12.24□□□□□ -0.45
NOD1-201ENST00000222823 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 RPSAP08865 295 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 SCP2P22307 547 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 AP3M2P53677 418 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 FAM102AQ5T9C2 384 aaPredicted RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 HVCN1Q96D96 273 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 RNPC3Q96LT9 517 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 MMP19Q99542 508 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 EFHD1Q9BUP0 239 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 GCOM2Q9BZD3 368 aaPredicted RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 KIF9Q9HAQ2 790 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
NOD1-201ENST00000222823 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 NR3C2P08235 984 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 MYBL1P10243 752 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 UCHL3P15374 230 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 CRLF3Q8IUI8 442 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 PDZD8Q8NEN9 1154 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 THOC1Q96FV9 657 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 A0A0G2JND7 137 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TTI1O43156 1089 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 BRAFP15056 766 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 GCKP35557 465 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 COPB2P35606 906 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 COG7P83436 770 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 GPS1Q13098 491 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 WDR72Q3MJ13 1102 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 KLC3Q6P597 504 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 COG1Q8WTW3 980 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TIPINQ9BVW5 301 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 A8MXQ7 604 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 GUCY2CP25092 1073 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 PPP4CP60510 307 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 RBM46Q8TBY0 533 aaKnown RBP12.23□□□□□ -0.45
NOD1-201ENST00000222823 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
NOD1-201ENST00000222823 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 ASB14A6NK59 587 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 TSPY1Q01534 308 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 ART3Q13508 389 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
NOD1-201ENST00000222823 STK33Q9BYT3 514 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms