RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 P4HA2O15460 535 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 MAGEB2O15479 319 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 EXTL3O43909 919 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 SERPING1P05155 500 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 ZNF865P0CJ78 1059 aaPredicted RBP23.32■■□□□ 1.32
SPAST-204ENST00000621856 HOXD8P13378 290 aaPredicted RBP23.32■■□□□ 1.32
SPAST-204ENST00000621856 KLRC1P26715 233 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 CYP24A1Q07973 514 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 CDCA2Q69YH5 1023 aaPredicted RBP23.32■■□□□ 1.32
SPAST-204ENST00000621856 KIAA1328Q86T90 577 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 TMC2Q8TDI7 906 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 ATRIPQ8WXE1 791 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 MFSD14AQ96MC6 490 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 NLRP4Q96MN2 994 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 ANKFY1Q9P2R3 1169 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 DNAI1Q9UI46 699 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 AGO2Q9UKV8 859 aaKnown RBP23.32■■□□□ 1.32
SPAST-204ENST00000621856 STYXL1Q9Y6J8 313 aa23.32■■□□□ 1.32
SPAST-204ENST00000621856 ASAP2O43150 1006 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 AKR1B10O60218 316 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 MXI1P50539 228 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 GNG11P61952 73 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 ARID5AQ03989 594 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 HSP90AA2PQ14568 343 aaPredicted RBP23.31■■□□□ 1.32
SPAST-204ENST00000621856 SPA17Q15506 151 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 IQCEQ6IPM2 695 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 GJB7Q6PEY0 223 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 EHBP1Q8NDI1 1231 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 PARD3BQ8TEW8 1205 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 ZBTB45Q96K62 511 aaPredicted RBP23.31■■□□□ 1.32
SPAST-204ENST00000621856 MRPL4Q9BYD3 311 aaKnown RBP23.31■■□□□ 1.32
SPAST-204ENST00000621856 AIPL1Q9NZN9 384 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 MYO6Q9UM54 1294 aa23.31■■□□□ 1.32
SPAST-204ENST00000621856 ALDH1A1P00352 501 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 EDN1P05305 212 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 PRKCBP05771 671 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 GJB1P08034 283 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 KIF11P52732 1056 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 FCGRTP55899 365 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 MAPK6Q16659 721 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 TLK2Q86UE8 772 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 MSTO1Q9BUK6 570 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 CCDC113Q9H0I3 377 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 AJAP1Q9UKB5 411 aaPredicted RBP23.3■■□□□ 1.32
SPAST-204ENST00000621856 GNEQ9Y223 722 aaKnown RBP23.3■■□□□ 1.32
SPAST-204ENST00000621856 SSU72P8A0A1W2PR75 194 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 LRRIQ3A6PVS8 624 aaPredicted RBP23.3■■□□□ 1.32
SPAST-204ENST00000621856 TOMM70O94826 608 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 PPFIA1Q13136 1202 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 MAPK8IP2Q13387 824 aaPredicted RBP23.3■■□□□ 1.32
SPAST-204ENST00000621856 HGSNATQ68CP4 663 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 ZPBP2Q6X784 338 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 ZNF668Q96K58 619 aaPredicted RBP23.3■■□□□ 1.32
SPAST-204ENST00000621856 TMEM117Q9H0C3 514 aa23.3■■□□□ 1.32
SPAST-204ENST00000621856 CTGFP29279 349 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 MCCD1P59942 119 aaPredicted RBP23.29■■□□□ 1.32
SPAST-204ENST00000621856 KLHL30Q0D2K2 578 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 ENOX2Q16206 610 aaKnown RBP23.29■■□□□ 1.32
SPAST-204ENST00000621856 APEX2Q9UBZ4 518 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 DNAJC12Q9UKB3 198 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 DAAM1Q9Y4D1 1078 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 KAT6AQ92794 2004 aa23.29■■□□□ 1.32
SPAST-204ENST00000621856 A6NJR5 290 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 KIF5CO60282 957 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 LDHAP00338 332 aaKnown RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 HARSP12081 509 aaKnown RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 TMOD1P28289 359 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 NLRP11P59045 1033 aaKnown RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 ENPEPQ07075 957 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 NOGQ13253 232 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 GRIK4Q16099 956 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 EPC2Q52LR7 807 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 LENG1Q96BZ8 264 aaPredicted RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 HAPLN2Q9GZV7 340 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 AP5M1Q9H0R1 490 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 AKT3Q9Y243 479 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 A0A0B4J269 797 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 PMM2O15305 246 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 MSCO60682 206 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 DLATP10515 647 aaKnown RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 STAT1P42224 750 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 ARHGAP25P42331 645 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 PSMC4P43686 418 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 ACOT2P49753 483 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 JAM2P57087 298 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 CHMP4BP1P59074 171 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 CYP27A1Q02318 531 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 JAKMIP2Q96AA8 810 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 POP1Q99575 1024 aaKnown RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 TMEM8AQ9HCN3 771 aa23.28■■□□□ 1.32
SPAST-204ENST00000621856 TOPORSQ9NS56 1045 aaPredicted RBP23.28■■□□□ 1.32
SPAST-204ENST00000621856 ZSWIM8A7E2V4 1837 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 INO80B-WBP1J3KQ70 363 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 CLDN3O15551 220 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 AOC2O75106 756 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 CASQ1P31415 396 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 GTF2H1P32780 548 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 PHKA2P46019 1235 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms