RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LRRC43Q8N309 656 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 SMG7Q92540 1137 aaKnown RBP7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 KXD1Q9BQD3 176 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 TMEM117Q9H0C3 514 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 CPVLQ9H3G5 476 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 EPB41L4AQ9HCS5 686 aaPredicted RBP7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 JADE2Q9NQC1 790 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 IL17RBQ9NRM6 502 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 NOB1Q9ULX3 412 aaKnown RBP7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 IRAK3Q9Y616 596 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 ASXL3Q9C0F0 2248 aa7.99□□□□□ -1.13
SCAMP1-206ENST00000618166 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 NCAM2O15394 837 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 BCAR3O75815 825 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 GNAI3P08754 354 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 SPATA31D3P0C874 917 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 CSRP1P21291 193 aaKnown RBP7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 RAP1GAPP47736 663 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 CCR3P51677 355 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 BCAR1P56945 870 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 CLLU1OSQ5K130 101 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 ZNF852Q6ZMS4 543 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 SPATA31D4Q6ZUB0 917 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 CYFIP1Q7L576 1253 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 CMASQ8NFW8 434 aaPredicted RBP7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 TMEM40Q8WWA1 233 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 TMEM161AQ9NX61 479 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 NOC2LQ9Y3T9 749 aaKnown RBP7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 SDK1Q7Z5N4 2213 aa7.98□□□□□ -1.13
SCAMP1-206ENST00000618166 LNP1A1A4G5 178 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 ATXN7O15265 892 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 CXCL12P48061 93 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 NTHL1P78549 312 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 FAM189BP81408 668 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PPP2R5DQ14738 602 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 DAB2IPQ5VWQ8 1189 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 AACSQ86V21 672 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PPFIBP1Q86W92 1011 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 RNF217Q8TC41 542 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 TMEM169Q96HH4 297 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 NELL2Q99435 816 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 CELF4Q9BZC1 486 aaKnown RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 CCDC86Q9H6F5 360 aaKnown RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PRKRIP1Q9H875 184 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 ZNF215Q9UL58 517 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 GINS2Q9Y248 185 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 SQORQ9Y6N5 450 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 WDR19Q8NEZ3 1342 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 FAM221BA6H8Z2 402 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 GNAI2P04899 355 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 CNR2P34972 360 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PXNP49023 591 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 SIM1P81133 766 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 DDX10Q13206 875 aaKnown RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 IER5Q5VY09 327 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 RNF169Q8NCN4 708 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 TRAPPC12Q8WVT3 735 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 STRBPQ96SI9 672 aaKnown RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PPP1R16BQ96T49 567 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 PDCD2LQ9BRP1 358 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 LMAN1LQ9HAT1 526 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 VPS45Q9NRW7 570 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 C1orf112Q9NSG2 853 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 ST3GAL5Q9UNP4 418 aa7.97□□□□□ -1.13
SCAMP1-206ENST00000618166 ATMQ13315 3056 aa7.96□□□□□ -1.13
SCAMP1-206ENST00000618166 C2CD2LO14523 706 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 CDX4O14627 284 aaPredicted RBP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 ZC3H11AO75152 810 aaKnown RBP eCLIP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 FAM193AP78312 1265 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 PFKPQ01813 784 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 GIT2Q14161 759 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 BMS1Q14692 1282 aaKnown RBP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 UAP1L1Q3KQV9 507 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 Q6ZS52 159 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 DDX53Q86TM3 631 aaKnown RBP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 HELQQ8TDG4 1101 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 IGSF21Q96ID5 467 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 PLA2G2FQ9BZM2 168 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 PIDD1Q9HB75 910 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 RBM12Q9NTZ6 932 aaKnown RBP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 CUEDC1Q9NWM3 386 aaPredicted RBP7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 TNNQ9UQP3 1299 aa7.96□□□□□ -1.14
SCAMP1-206ENST00000618166 APC2O95996 2303 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 ABCA12Q86UK0 2595 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 M0QZ92 97 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 OPLAHO14841 1288 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 B4GALT3O60512 393 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 LILRB3O75022 631 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 RPS6KA5O75582 802 aa7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 ALDH7A1P49419 539 aaKnown RBP7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 POLGP54098 1239 aaPredicted RBP7.95□□□□□ -1.14
SCAMP1-206ENST00000618166 PGM5Q15124 567 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms