RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ATF7P17544 494 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 NDUFA8P51970 172 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ASIC1P78348 528 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 TAP1Q03518 808 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 LONRF3Q496Y0 759 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 SLC27A1Q6PCB7 646 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 HAUS6Q7Z4H7 955 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ZNF598Q86UK7 904 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 SFR1Q86XK3 245 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 CCDC65Q8IXS2 484 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 CMTR2Q8IYT2 770 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 CNNM3Q8NE01 707 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 ADPGKQ9BRR6 497 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 EIF2AQ9BY44 585 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 MRPL4Q9BYD3 311 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 RC3H2Q9HBD1 1191 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 PANK4Q9NVE7 773 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 SEL1LQ9UBV2 794 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 USP20Q9Y2K6 914 aa21.62■■□□□ 1.05
SHKBP1-214ENST00000597396 FAM237AA0A1B0GTK4 181 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 TTLL13PA6NNM8 815 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 SLFN14P0C7P3 912 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 MAPTP10636 758 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 AFMP43652 599 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 NT5DC1Q5TFE4 455 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 ATF7IP2Q5U623 682 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 TAS1R3Q7RTX0 852 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 HACE1Q8IYU2 909 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 LPPQ93052 612 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 TRIM9Q9C026 710 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 TMEM117Q9H0C3 514 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 GOLPH3LQ9H4A5 285 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 PDZD7Q9H5P4 517 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 CITO14578 2027 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 TRIP11Q15643 1979 aa21.61■■□□□ 1.05
SHKBP1-214ENST00000597396 ACTN4O43707 911 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 ITGA4P13612 1032 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 SCP2P22307 547 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 NMT1P30419 496 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 HERC4Q5GLZ8 1057 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 APBB1IPQ7Z5R6 666 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 MRPL10Q7Z7H8 261 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 HELQQ8TDG4 1101 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 TGS1Q96RS0 853 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 MRPL44Q9H9J2 332 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 CERS4Q9HA82 394 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 RNF19AQ9NV58 838 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 IPPQ9Y573 584 aa21.6■■□□□ 1.05
SHKBP1-214ENST00000597396 ABCD1P33897 745 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 GRIN2CQ14957 1233 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 CLLU1OSQ5K130 101 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 EEF1DP3Q658K8 133 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 SMG8Q8ND04 991 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 BICD1Q96G01 975 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 ACO2Q99798 780 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 C7orf25Q9BPX7 421 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 TARS2Q9BW92 718 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 APOL6Q9BWW8 343 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 COL25A1Q9BXS0 654 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 TBC1D7Q9P0N9 293 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 MTUS1Q9ULD2 1270 aa21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 COL4A4P53420 1690 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-214ENST00000597396 FRMD3A2A2Y4 597 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 COASYQ13057 564 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 DCAF4L1Q3SXM0 396 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 SPOUT1Q5T280 376 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 GLB1LQ6UWU2 654 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 GRAMD1CQ8IYS0 662 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 ARNTL2Q8WYA1 636 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 SAMD11Q96NU1 681 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 CASD1Q96PB1 797 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 FIZ1Q96SL8 496 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 BLZF1Q9H2G9 400 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 NXF3Q9H4D5 531 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 RSAD1Q9HA92 442 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 TNFSF13BQ9Y275 285 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 INPP5FQ9Y2H2 1132 aa21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 MRPL42Q9Y6G3 142 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-214ENST00000597396 MEIS3P2A8K0S8 358 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 ZNF202O95125 648 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 CASP1P29466 404 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 ERVK-21P61565 698 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 ZNF568Q3ZCX4 644 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 CNNM4Q6P4Q7 775 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 AGMOQ6ZNB7 445 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 SPRED2Q7Z698 418 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 LRRC43Q8N309 656 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 KCNN1Q92952 543 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 PAGE5Q96GU1 130 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 C17orf80Q9BSJ5 609 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 TCHPQ9BT92 498 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 MRPL9Q9BYD2 267 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 UBN1Q9NPG3 1134 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 OLFML3Q9NRN5 406 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 TBX20Q9UMR3 447 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 RWDD3Q9Y3V2 267 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 HES2Q9Y543 173 aa21.57■■□□□ 1.04
SHKBP1-214ENST00000597396 CDH23Q9H251 3354 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 UNC80Q8N2C7 3258 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 GCNT3O95395 438 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms