RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CXCL14O95715 111 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 GLP2RO95838 553 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 PDCP20941 246 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 CDC25AP30304 524 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 SLC11A1P49279 550 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 SMAD4Q13485 552 aaKnown RBP11.63□□□□□ -0.55
CCDC9-203ENST00000596938 GIT2Q14161 759 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
CCDC9-203ENST00000596938 MAPK6Q16659 721 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 HYIQ5T013 277 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 VPS52Q8N1B4 723 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 FAM193BQ96PV7 902 aaPredicted RBP11.63□□□□□ -0.55
CCDC9-203ENST00000596938 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
CCDC9-203ENST00000596938 CD320Q9NPF0 282 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 DNAJB4Q9UDY4 337 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 FAN1Q9Y2M0 1017 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 HES2Q9Y543 173 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 IRAK3Q9Y616 596 aa11.63□□□□□ -0.55
CCDC9-203ENST00000596938 C2orf71A6NGG8 1288 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 E9PMD0 336 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 NRP1O14786 923 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 SLC26A4O43511 780 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 BMP15O95972 392 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 POMCP01189 267 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 CTSAP10619 480 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 PRPF4BQ13523 1007 aaKnown RBP11.62□□□□□ -0.55
CCDC9-203ENST00000596938 C1orf186Q6ZWK4 172 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 TMEM173Q86WV6 379 aaPredicted RBP11.62□□□□□ -0.55
CCDC9-203ENST00000596938 ADHFE1Q8IWW8 467 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 SMRP1Q8NCR6 262 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 DEPTORQ8TB45 409 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 INTS4Q96HW7 963 aaKnown RBP11.62□□□□□ -0.55
CCDC9-203ENST00000596938 AK8Q96MA6 479 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 GAD1Q99259 594 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 TIPINQ9BVW5 301 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 GBP3Q9H0R5 595 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 ZBP1Q9H171 429 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
CCDC9-203ENST00000596938 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 PI4K2BG5E9Z4 385 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 N4BP3O15049 544 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 B4GALT3O60512 393 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 NPTXRO95502 500 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 HOXB8P17481 243 aaPredicted RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 ZP2Q05996 745 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 DSC1Q08554 894 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 CLUL1Q15846 466 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 KCNK18Q7Z418 384 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 COLGALT2Q8IYK4 626 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 DAW1Q8N136 415 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 SYT2Q8N9I0 419 aaPredicted RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 GSTCDQ8NEC7 633 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 BCL7CQ8WUZ0 217 aaPredicted RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 DRC1Q96MC2 740 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 POP1Q99575 1024 aaKnown RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 NTPCRQ9BSD7 190 aaKnown RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 C1QTNF1Q9BXJ1 281 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 POLD4Q9HCU8 107 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 MIOSQ9NXC5 875 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 BARX2Q9UMQ3 279 aaPredicted RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
CCDC9-203ENST00000596938 NLRC5Q86WI3 1866 aa11.61□□□□□ -0.55
CCDC9-203ENST00000596938 MYO7AQ13402 2215 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 BRWD1Q9NSI6 2320 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 NCOR1O75376 2440 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 K7ERI5 159 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 CLASP2O75122 1294 aaKnown RBP11.6□□□□□ -0.55
CCDC9-203ENST00000596938 HIP1RO75146 1068 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 NR1I2O75469 434 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 EFEMP2O95967 443 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 PRKCBP05771 671 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 AKAP5P24588 427 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 GUCY2CP25092 1073 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 MLH1P40692 756 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 NPTX2P47972 431 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 SCNN1GP51170 649 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 PEX3P56589 373 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 RBM10P98175 930 aaKnown RBP11.6□□□□□ -0.55
CCDC9-203ENST00000596938 ANKRD54Q6NXT1 300 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 CDR2LQ86X02 465 aaPredicted RBP11.6□□□□□ -0.55
CCDC9-203ENST00000596938 ZFP42Q96MM3 310 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 PNMA5Q96PV4 448 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 ADPGKQ9BRR6 497 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 VN1R3Q9BXE9 311 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 S1PR5Q9H228 398 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms