RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 NXF1Q9UBU9 619 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DDTLA6NHG4 134 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ACADMP11310 421 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 CCNE1P24864 410 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ITGA7Q13683 1181 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TFDP2Q14188 446 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ANKS3Q6ZW76 656 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DEFB128Q7Z7B8 93 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TBC1D10CQ8IV04 446 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 TMEM86AQ8N2M4 240 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ATP6V0D2Q8N8Y2 350 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 RSAD2Q8WXG1 361 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 AGBL1Q96MI9 1066 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 KIF2CQ99661 725 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 KCNH7Q9NS40 1196 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 DZANK1Q9NVP4 752 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 RBAKQ9NYW8 714 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-212ENST00000591126 GDAQ9Y2T3 454 aa6.75□□□□□ -1.33
SMAD4-212ENST00000591126 ASGR1P07306 291 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 PAMP19021 973 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CYP11B2P19099 503 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 GJC1P36383 396 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 GARSP41250 739 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 DPP6P42658 865 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 MYBPC2Q14324 1141 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SCYL2Q6P3W7 929 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 TTC13Q8NBP0 860 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 NSUN7Q8NE18 718 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 LARP6Q9BRS8 491 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SPG21Q9NZD8 308 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 MRFAP1Q9Y605 127 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 DNM1LO00429 736 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 RPL9P32969 192 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ARL4DP49703 201 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 NFIAQ12857 509 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ME3Q16798 604 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ANO4Q32M45 955 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 RABGAP1LQ5R372 815 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 C6orf163Q5TEZ5 329 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 OR6B2Q6IFH4 312 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SMIM5Q71RC9 77 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 TTC30AQ86WT1 665 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ERICH1Q86X53 443 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CEP112Q8N8E3 955 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 BANK1Q8NDB2 785 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CDKL2Q92772 493 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 GJA10Q969M2 543 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ZDHHC4Q9NPG8 344 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CYP26B1Q9NR63 512 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SAMD15Q9P1V8 674 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SF3B1O75533 1304 aaKnown RBP eCLIP6.74□□□□□ -1.337e-6■■■■■ 33.4
SMAD4-212ENST00000591126 NEDD4P46934 1319 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 COL16A1Q07092 1604 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 hCG_1642624A0A1W2PR95 340 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 EIF4E1BA6NMX2 242 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 GMNNO75496 209 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SHMT1P34896 483 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CRYBB1P53674 252 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SCRN1Q12765 414 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CELF3Q5SZQ8 465 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SPATA1Q5VX52 437 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 SRRM1Q8IYB3 904 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 PPTC7Q8NI37 304 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 AFG3L2Q9Y4W6 797 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 KANSL1LA0AUZ9 987 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 PDXKO00764 312 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 RPA1P27694 616 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ADCYAP1R1P41586 468 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 HSD17B4P51659 736 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF135P52742 658 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 LBX1P52954 281 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ITPRIPL1Q6GPH6 555 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 LBX2Q6XYB7 198 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ADAT2Q7Z6V5 191 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 ZNF589Q86UQ0 364 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 UNC45BQ8IWX7 931 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 PDCL2Q8N4E4 241 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 PIK3R5Q8WYR1 880 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 EPAS1Q99814 870 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 MKNK1Q9BUB5 465 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 LSM14BQ9BX40 385 aaKnown RBP6.74□□□□□ -1.33
SMAD4-212ENST00000591126 CCSER1Q9C0I3 900 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 AMFRQ9UKV5 643 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 GIT1Q9Y2X7 761 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 INSL6Q9Y581 213 aa6.74□□□□□ -1.33
SMAD4-212ENST00000591126 RGPD1P0DJD0 1748 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 MON2Q7Z3U7 1717 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 ANKRD26Q9UPS8 1709 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-212ENST00000591126 SMIM35A0A1B0GVV1 85 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-212ENST00000591126 F9P00740 461 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 VCLP18206 1134 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 KLRC1P26715 233 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 GTF2H1P32780 548 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 PHBP35232 272 aa6.73□□□□□ -1.33
SMAD4-212ENST00000591126 NOP14P78316 857 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms