RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CTAGE4Q8IX94 777 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ZC3H3Q8IXZ2 948 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 MSL3Q8N5Y2 521 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 NEK11Q8NG66 645 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 NSUN6Q8TEA1 469 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 CLEC4DQ8WXI8 215 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CCDC42Q96M95 316 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 MROH8Q9H579 483 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 TUFT1Q9NNX1 390 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ARFGAP3Q9NP61 516 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 SLC39A2Q9NP94 309 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 GJD2Q9UKL4 321 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 PLAGL2Q9UPG8 496 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 COL4A3BPQ9Y5P4 624 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 TNRC18O15417 2968 aaPredicted RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 SSU72P8A0A1W2PR75 194 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CCDC151A5D8V7 595 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 RNF225M0QZC1 329 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 MEIS1O00470 390 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 PDXKO00764 312 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CETN3O15182 167 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CALUO43852 315 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 COBLO75128 1261 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 FAM13AO94988 1023 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 PRLRP16471 622 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 TAL1P17542 331 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 CCNA1P78396 465 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 COASYQ13057 564 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 GPS2Q13227 327 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 TMEM132BQ14DG7 1078 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CTC1Q2NKJ3 1217 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ZCWPW2Q504Y3 356 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CEP55Q53EZ4 464 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 C4orf17Q53FE4 359 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 HERC4Q5GLZ8 1057 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 CCDC122Q5T0U0 273 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 C10orf76Q5T2E6 689 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 UTP14CQ5TAP6 766 aaKnown RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 WDR59Q6PJI9 974 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 LRRC55Q6ZSA7 311 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 STXBP4Q6ZWJ1 553 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 GPR142Q7Z601 462 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 SLC35F6Q8N357 371 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CCDC155Q8N6L0 562 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 SYT2Q8N9I0 419 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 REPS2Q8NFH8 660 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 GPRC5AQ8NFJ5 357 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 TRIM58Q8NG06 486 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ETNPPLQ8TBG4 499 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 RNF217Q8TC41 542 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 RUBCNQ92622 972 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 USP6NLQ92738 828 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 JAKMIP2Q96AA8 810 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ZNF333Q96JL9 665 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CDHR1Q96JP9 859 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 MOV10L1Q9BXT6 1211 aaKnown RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 WDR11Q9BZH6 1224 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ACAD9Q9H845 621 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 NHEJ1Q9H9Q4 299 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 TBC1D22BQ9NU19 505 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 CEP72Q9P209 647 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 ZNF214Q9UL59 606 aaPredicted RBP6.29□□□□□ -1.4
SDF2-206ENST00000587788 MYO6Q9UM54 1294 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 TRAF3IP3Q9Y228 551 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 SIK3Q9Y2K2 1263 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 DAAM1Q9Y4D1 1078 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 KIAA1217Q5T5P2 1943 aa6.29□□□□□ -1.4
SDF2-206ENST00000587788 UBE4BO95155 1302 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 KIAA0100Q14667 2235 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 OPLAHO14841 1288 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SLC16A3O15427 465 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 ADCY3O60266 1144 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 TACC1O75410 805 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 EIF3JO75822 258 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDF2-206ENST00000587788 EYA4O95677 639 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SSBP05455 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDF2-206ENST00000587788 TGFB3P10600 412 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CYP11B2P19099 503 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CYP2B6P20813 491 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 MPSTP25325 297 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 GRK4P32298 578 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 VAV2P52735 878 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SLC12A3P55017 1021 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 PRMT2P55345 433 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RPS6P62753 249 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 CBX1P83916 185 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SETQ01105 290 aaPredicted RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 SPIRE1Q08AE8 756 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms