RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ARL5CA6NH57 179 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 TTLL13PA6NNM8 815 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 E9PMD0 336 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 NPTXRO95502 500 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 SSTR3P32745 418 aaPredicted RBP23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 CUL4AQ13619 759 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 SMC1AQ14683 1233 aaKnown RBP23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 SLC27A1Q6PCB7 646 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 PPP4R3CPQ6ZMV5 832 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 VPS52Q8N1B4 723 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 ZFP42Q96MM3 310 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 GAD1Q99259 594 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 FZD8Q9H461 694 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 PRMT7Q9NVM4 692 aaPredicted RBP23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 DNM3Q9UQ16 869 aa23.73■■□□□ 1.39
PPP4R1-228ENST00000584074 C2orf71A6NGG8 1288 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 EYA4O95677 639 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 MLH1P40692 756 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 ZP2Q05996 745 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 COASYQ13057 564 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 KCNC3Q14003 757 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 DDX53Q86TM3 631 aaKnown RBP23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 SMRP1Q8NCR6 262 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 AUTS2Q8WXX7 1259 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 FAM193BQ96PV7 902 aaPredicted RBP23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 C2orf40Q9H1Z8 148 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 EPHX3Q9H6B9 360 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 PRKAG3Q9UGI9 489 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 USP20Q9Y2K6 914 aa23.72■■□□□ 1.39
PPP4R1-228ENST00000584074 FSD2A1L4K1 749 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 CARNS1A5YM72 827 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 CXCL14O95715 111 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 AKAP5P24588 427 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 CA8P35219 290 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 NAMPTP43490 491 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 ZRSR1Q15695 479 aaKnown RBP23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 FAM187BQ17R55 369 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 LLGL2Q6P1M3 1020 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 KCNK18Q7Z418 384 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 ADHFE1Q8IWW8 467 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 DEPTORQ8TB45 409 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 PRIMPOLQ96LW4 560 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 KIFC3Q9BVG8 833 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 VN1R3Q9BXE9 311 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 CCDC113Q9H0I3 377 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 ZBP1Q9H171 429 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 MIOSQ9NXC5 875 aa23.71■■□□□ 1.39
PPP4R1-228ENST00000584074 VWA3AA6NCI4 1184 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 INPPL1O15357 1258 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 ALDH2P05091 517 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 EDN1P05305 212 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 LIG1P18858 919 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 SCNN1GP51170 649 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 PPP2R5AQ15172 486 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 MAPK6Q16659 721 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 HACE1Q8IYU2 909 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 KIFAP3Q92845 792 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 IFT74Q96LB3 600 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 TMEM175Q9BSA9 504 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 FAN1Q9Y2M0 1017 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 GIT1Q9Y2X7 761 aa23.7■■□□□ 1.38
PPP4R1-228ENST00000584074 NRP1O14786 923 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 PRKCBP05771 671 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 PRPF4BQ13523 1007 aaKnown RBP23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 TMEM184AQ6ZMB5 413 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 RUSC1Q9BVN2 902 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 PDZD7Q9H5P4 517 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 KLK14Q9P0G3 267 aa23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 USP15Q9Y4E8 981 aaPredicted RBP23.69■■□□□ 1.38
PPP4R1-228ENST00000584074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 C19orf67A6NJJ6 358 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 ACKR2O00590 384 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 CTSAP10619 480 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 BMS1Q14692 1282 aaKnown RBP23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 TMEM132AQ24JP5 1023 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 ARL6IP4Q66PJ3 421 aaKnown RBP23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 COLGALT2Q8IYK4 626 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 DAW1Q8N136 415 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 GSTCDQ8NEC7 633 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 PNMA5Q96PV4 448 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 PARP2Q9UGN5 583 aa23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 PRG3Q9Y2Y8 225 aaPredicted RBP23.68■■□□□ 1.38
PPP4R1-228ENST00000584074 VPS37CA5D8V6 355 aaPredicted RBP23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 N4BP3O15049 544 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 CLASP2O75122 1294 aaKnown RBP23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 SRGAP2BP0DMP2 458 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 EFNA5P52803 228 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 DSC1Q08554 894 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 ANKRD54Q6NXT1 300 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 BRAPQ7Z569 592 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 PLIN2Q99541 437 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 HCFC2Q9Y5Z7 792 aa23.67■■□□□ 1.38
PPP4R1-228ENST00000584074 HIP1RO75146 1068 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 OR1G1P47890 313 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 PEX3P56589 373 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 HYIQ5T013 277 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 EEF1DP3Q658K8 133 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 RINT1Q6NUQ1 792 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 SYCE2Q6PIF2 218 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 C1orf186Q6ZWK4 172 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms