RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TIPINQ9BVW5 301 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 TRIM6Q9C030 488 aaPredicted RBP11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 C17orf75Q9HAS0 396 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 TLR9Q9NR96 1032 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 USP20Q9Y2K6 914 aa11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 SRPRBQ9Y5M8 271 aaKnown RBP11.33□□□□□ -0.6
PPP4R1-220ENST00000581835 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 CCDC169A6NNP5 214 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 K7ERI5 159 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 FSCN2O14926 492 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 INPPL1O15357 1258 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 NCK2O43639 380 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 B4GALT3O60512 393 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 DDHD2O94830 711 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 NPTXRO95502 500 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 POMCP01189 267 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 GALTP07902 379 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 LIG1P18858 919 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 GTF2F1P35269 517 aaKnown RBP eCLIP11.32□□□□□ -0.68e-7■■□□□ 14.3
PPP4R1-220ENST00000581835 KRT17Q04695 432 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PRPF4BQ13523 1007 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 CTC1Q2NKJ3 1217 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 SPECC1Q5M775 1068 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 ADGRD2Q7Z7M1 963 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 ZNF280BQ86YH2 543 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 GAD1Q99259 594 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 NTPCRQ9BSD7 190 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 BLOC1S4Q9NUP1 217 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 MIOSQ9NXC5 875 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 KCND2Q9NZV8 630 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 KANSL3Q9P2N6 904 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 DNAJB4Q9UDY4 337 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 GIT1Q9Y2X7 761 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 MORC2Q9Y6X9 1032 aaPredicted RBP11.32□□□□□ -0.6
PPP4R1-220ENST00000581835 CITO14578 2027 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 NPHP3-ACAD11A0A0J9YXS1 232 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 CARNS1A5YM72 827 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 ARL5CA6NH57 179 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 SFI1A8K8P3 1242 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 N4BP3O15049 544 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 PLCG1P19174 1290 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 KCNA5P22460 613 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 AKAP5P24588 427 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 LTBRP36941 435 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 MLH1P40692 756 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 DMP1Q13316 513 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 LEXMQ3ZCV2 418 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 HACE1Q8IYU2 909 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 GSTCDQ8NEC7 633 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 IGSF21Q96ID5 467 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 TCF25Q9BQ70 676 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 CLDND1Q9NY35 253 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 ARHGAP28Q9P2N2 729 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
PPP4R1-220ENST00000581835 H3BQ06 376 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 LINC01565O15544 149 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ALDH2P05091 517 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 PLS3P13797 630 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 NRIP1P48552 1158 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 SLC11A1P49279 550 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 SCNN1GP51170 649 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 DLX2Q07687 328 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ADAM15Q13444 863 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 MCM6Q14566 821 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms