RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 DDX4Q9NQI0 724 aaKnown RBP8.07□□□□□ -1.12
TVP23C-208ENST00000581273 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.07□□□□□ -1.12
TVP23C-208ENST00000581273 PDP2Q9P2J9 529 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 SCOCQ9UIL1 159 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 RASAL2Q9UJF2 1139 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 DENND2AQ9ULE3 1009 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 NOVA2Q9UNW9 492 aaKnown RBP8.07□□□□□ -1.12
TVP23C-208ENST00000581273 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 SLC45A1Q9Y2W3 748 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
TVP23C-208ENST00000581273 USP15Q9Y4E8 981 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-208ENST00000581273 LRRC42Q9Y546 428 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 PCDHB6Q9Y5E3 794 aa8.07□□□□□ -1.12
TVP23C-208ENST00000581273 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LAD1O00515 517 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 GPAA1O43292 621 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 PENKP01210 267 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 HMGCRP04035 888 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 GLI1P08151 1106 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 MMEP08473 750 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 NUDT17P0C025 328 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 GNAT1P11488 350 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 SKIP12755 728 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 CYP2B6P20813 491 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 STAT6P42226 847 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 HMGCS2P54868 508 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 HAND2P61296 217 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 MAGOHP61326 146 aaKnown RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 PSMD2Q13200 908 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TMED1Q13445 227 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 COL9A2Q14055 689 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 WTAPQ15007 396 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ACCSLQ4AC99 568 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 SPDYAQ5MJ70 313 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TTC38Q5R3I4 469 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 WASHC2DQ5SRD0 308 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 NFRKBQ6P4R8 1299 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TBC1D1Q86TI0 1168 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LCA5Q86VQ0 697 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 GRAMD1CQ8IYS0 662 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 B4GALNT2Q8NHY0 566 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 IGDCC4Q8TDY8 1250 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 DYDC1Q8WWB3 177 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 P2RX5Q93086 422 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 PHKBQ93100 1093 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 OSBP2Q969R2 916 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 MAGOHBQ96A72 148 aaKnown RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 KRT12Q99456 494 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TUBB6Q9BUF5 446 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TLR10Q9BXR5 811 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ECT2Q9H8V3 914 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 CABP5Q9NP86 173 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 DMAP1Q9NPF5 467 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 INTS9Q9NV88 658 aaKnown RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 AIPL1Q9NZN9 384 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ITGB1BP2Q9UKP3 347 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 PNMA3Q9UL41 463 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 TMCO1Q9UM00 188 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ARL2BPQ9Y2Y0 163 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 NFS1Q9Y697 457 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 BZW2Q9Y6E2 419 aaKnown RBP8.06□□□□□ -1.12
TVP23C-208ENST00000581273 ATRNL1Q5VV63 1379 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 LAMA4Q16363 1823 aa8.06□□□□□ -1.12
TVP23C-208ENST00000581273 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PTPRZ1P23471 2315 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PRR33A8MZF0 331 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PGRMC1O00264 195 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 RGS16O15492 202 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 RANBP6O60518 1105 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PEX10O60683 326 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 ATP2C2O75185 946 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 RHOBTB3O94955 611 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 SERPING1P05155 500 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PCP11498 1178 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CALML3P27482 149 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CDC25AP30304 524 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 EIF4A3P38919 411 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 PRCPP42785 496 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 MSH2P43246 934 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 TIMM10P62072 90 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 CTDSPL2Q05D32 466 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 BNIP1Q12981 228 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 NAB2Q15742 525 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 MAN2A1Q16706 1144 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 FAM110CQ1W6H9 321 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 VARS2Q5ST30 1063 aaKnown RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 AKNAD1Q5T1N1 836 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 MEI1Q5TIA1 1274 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
TVP23C-208ENST00000581273 SPTY2D1Q68D10 685 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-208ENST00000581273 DENND2CQ68D51 928 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms