RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CHTF18Q8WVB6 975 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 CELF1Q92879 486 aaKnown RBP6.81□□□□□ -1.32
SF3B3-214ENST00000572365 PCGF6Q9BYE7 350 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 THG1LQ9NWX6 298 aaKnown RBP6.81□□□□□ -1.32
SF3B3-214ENST00000572365 MTMR10Q9NXD2 777 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 DSEQ9UL01 958 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 SRPK3Q9UPE1 567 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 MAP3K15Q6ZN16 1313 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 MAN2B1O00754 1011 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 TADA3O75528 432 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 SASH1O94885 1247 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 KRT15P19012 456 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 ARL4AP40617 200 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 FIGNQ5HY92 759 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 STEAP3Q658P3 488 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 BICRALQ6AI39 1079 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 KIF6Q6ZMV9 814 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 DCP2Q8IU60 420 aaKnown RBP6.8□□□□□ -1.32
SF3B3-214ENST00000572365 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 UTP14AQ9BVJ6 771 aaKnown RBP6.8□□□□□ -1.32
SF3B3-214ENST00000572365 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
SF3B3-214ENST00000572365 EMC7Q9NPA0 242 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 DUOX1Q9NRD9 1551 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 OXSMQ9NWU1 459 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 ZMYND8Q9ULU4 1186 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-214ENST00000572365 STXBP5LQ9Y2K9 1186 aa6.8□□□□□ -1.32
SF3B3-214ENST00000572365 TTC28Q96AY4 2481 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 RIC1Q4ADV7 1423 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 HGSO14964 777 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 MAFKO60675 156 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 SYN1P17600 705 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 RPS12P25398 132 aaKnown RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 EPHA5P54756 1037 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 FKBP1BP68106 108 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 TMPRSS15P98073 1019 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 AIMP1Q12904 312 aaKnown RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 GRAPQ13588 217 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 ATP13A4Q4VNC1 1196 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 ARMC9Q7Z3E5 817 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 PPP1R42Q7Z4L9 355 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 C11orf74Q86VG3 221 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 NLGN4XQ8N0W4 816 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 EFHBQ8N7U6 833 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 GRAPLQ8TC17 118 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 PHOSPHO1Q8TCT1 267 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 SEC14L1Q92503 715 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 SCYL1Q96KG9 808 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 RC3H2Q9HBD1 1191 aaKnown RBP6.79□□□□□ -1.32
SF3B3-214ENST00000572365 SPTLC3Q9NUV7 552 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 PCDHAC2Q9Y5I4 1007 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 DOCK3Q8IZD9 2030 aa6.79□□□□□ -1.32
SF3B3-214ENST00000572365 ANKRD36CQ5JPF3 1778 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 MANSC4A6NHS7 340 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 ERVV-1B6SEH8 477 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 HYAL3O43820 417 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 CLASP2O75122 1294 aaKnown RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 KATNA1O75449 491 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 CYBBP04839 570 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 DBHP09172 617 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 NF2P35240 595 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 ZNF280AP59817 542 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 IRF9Q00978 393 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 MTMR1Q13613 665 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 SLC10A5Q5PT55 438 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 ZMYM1Q5SVZ6 1142 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 FSTL4Q6MZW2 842 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 KCTD1Q719H9 257 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 TBC1D16Q8TBP0 767 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 ASPSCR1Q9BZE9 553 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 H2AFY2Q9P0M6 372 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
SF3B3-214ENST00000572365 NR2E3Q9Y5X4 410 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 B3GALT1Q9Y5Z6 326 aa6.78□□□□□ -1.32
SF3B3-214ENST00000572365 TCF20Q9UGU0 1960 aaKnown RBP6.77□□□□□ -1.33
SF3B3-214ENST00000572365 WNT10BO00744 389 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 KCNK3O14649 394 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 SGSM2O43147 1006 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 TGM5O43548 720 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 UFL1O94874 794 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 EIF2S2P20042 333 aaKnown RBP6.77□□□□□ -1.33
SF3B3-214ENST00000572365 AFMP43652 599 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 PROSER3Q2NL68 480 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
SF3B3-214ENST00000572365 PAQR3Q6TCH7 311 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 ABI1Q8IZP0 508 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 ABHD4Q8TB40 342 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 DLG3Q92796 817 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 PEX11GQ96HA9 241 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 TRIM8Q9BZR9 551 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 CD244Q9BZW8 370 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms