RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 AFF1P51825 1210 aaKnown RBP23.28■■□□□ 1.32
HERC2-204ENST00000563945 CYP4A11Q02928 519 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 TDGQ13569 410 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 CTTNQ14247 550 aaKnown RBP23.28■■□□□ 1.32
HERC2-204ENST00000563945 C15orf39Q6ZRI6 1047 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 TMEM105Q8N8V8 129 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 WASF1Q92558 559 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 TRIM6Q9C030 488 aaPredicted RBP23.28■■□□□ 1.32
HERC2-204ENST00000563945 BRMS1Q9HCU9 246 aa23.28■■□□□ 1.32
HERC2-204ENST00000563945 WRAP73Q9P2S5 460 aaPredicted RBP23.28■■□□□ 1.32
HERC2-204ENST00000563945 INO80B-WBP1J3KQ70 363 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 STAMQ92783 540 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 HAS1Q92839 578 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 CCDC51Q96ER9 411 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 RPS6KC1Q96S38 1066 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 COLEC11Q9BWP8 271 aa23.27■■□□□ 1.32
HERC2-204ENST00000563945 LILRB3O75022 631 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 GLUD2P49448 558 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 SCRN1Q12765 414 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 POTEDQ86YR6 584 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 GAD1Q99259 594 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 HERC2P3Q9BVR0 1158 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 MAN1C1Q9NR34 630 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 IPPQ9Y573 584 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 STK36Q9NRP7 1315 aa23.26■■□□□ 1.31
HERC2-204ENST00000563945 PTPRZ1P23471 2315 aaPredicted RBP23.25■■□□□ 1.31
HERC2-204ENST00000563945 CCDC195A0A1B0GUA6 201 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 STK25O00506 426 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 GLUD1P00367 558 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 RFX1P22670 979 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 GBP2P32456 591 aaPredicted RBP23.25■■□□□ 1.31
HERC2-204ENST00000563945 PTENP60484 403 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 CYP26C1Q6V0L0 522 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 COLGALT2Q8IYK4 626 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 SMG8Q8ND04 991 aaKnown RBP23.25■■□□□ 1.31
HERC2-204ENST00000563945 CPB2Q96IY4 423 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 APOL6Q9BWW8 343 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 CSRNP2Q9H175 543 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 KCNK12Q9HB15 430 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 IGSF9Q9P2J2 1179 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 ORC3Q9UBD5 711 aaPredicted RBP23.25■■□□□ 1.31
HERC2-204ENST00000563945 PCDHA12Q9UN75 941 aa23.25■■□□□ 1.31
HERC2-204ENST00000563945 ARL5CA6NH57 179 aa23.24■■□□□ 1.31
HERC2-204ENST00000563945 ZBTB39O15060 712 aa23.24■■□□□ 1.31
HERC2-204ENST00000563945 MLH1P40692 756 aa23.24■■□□□ 1.31
HERC2-204ENST00000563945 CMASQ8NFW8 434 aaPredicted RBP23.24■■□□□ 1.31
HERC2-204ENST00000563945 OXER1Q8TDS5 423 aa23.24■■□□□ 1.31
HERC2-204ENST00000563945 EIF2AQ9BY44 585 aaKnown RBP23.24■■□□□ 1.31
HERC2-204ENST00000563945 PIDD1Q9HB75 910 aa23.24■■□□□ 1.31
HERC2-204ENST00000563945 PROB1E7EW31 1015 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 TEX28O15482 410 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 TSPAN1O60635 241 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 KRT2P35908 639 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 POU5F1BQ06416 359 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 TAS1R1Q7RTX1 841 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 EIF2AK1Q9BQI3 630 aaKnown RBP23.23■■□□□ 1.31
HERC2-204ENST00000563945 RTP3Q9BQQ7 232 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 GJB4Q9NTQ9 266 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 ANKEF1Q9NU02 776 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 GIT1Q9Y2X7 761 aa23.23■■□□□ 1.31
HERC2-204ENST00000563945 INPPL1O15357 1258 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 PFKFB2O60825 505 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 DGAT1O75907 488 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 SLITRK3O94933 977 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 MYBP10242 640 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 SCNN1GP51170 649 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 ANKRD1Q15327 319 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 CALCRLQ16602 461 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 SMG7Q92540 1137 aaKnown RBP23.22■■□□□ 1.31
HERC2-204ENST00000563945 RNF39Q9H2S5 420 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 MARCH5Q9NX47 278 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 DUSP12Q9UNI6 340 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 HES2Q9Y543 173 aa23.22■■□□□ 1.31
HERC2-204ENST00000563945 NBL1P41271 181 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 KIAA0319Q5VV43 1072 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 PALB2Q86YC2 1186 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 SIX5Q8N196 739 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 FEZF2Q8TBJ5 459 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 HDAC7Q8WUI4 952 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 ZFP42Q96MM3 310 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 PLEKHA4Q9H4M7 779 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 RXFP1Q9HBX9 757 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 WDR6Q9NNW5 1121 aaKnown RBP23.21■■□□□ 1.31
HERC2-204ENST00000563945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.21■■□□□ 1.31
HERC2-204ENST00000563945 PARP2Q9UGN5 583 aa23.21■■□□□ 1.31
HERC2-204ENST00000563945 AOC1P19801 751 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 DSG1Q02413 1049 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 DSC1Q08554 894 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 SPIRE1Q08AE8 756 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 USP41Q3LFD5 358 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 IFNLR1Q8IU57 520 aaPredicted RBP23.2■■□□□ 1.3
HERC2-204ENST00000563945 NKD2Q969F2 451 aaPredicted RBP23.2■■□□□ 1.3
HERC2-204ENST00000563945 TTC12Q9H892 705 aaPredicted RBP23.2■■□□□ 1.3
HERC2-204ENST00000563945 XPNPEP1Q9NQW7 623 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 MIOSQ9NXC5 875 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 TPCN1Q9ULQ1 816 aa23.2■■□□□ 1.3
HERC2-204ENST00000563945 CLUHO75153 1309 aa23.19■■□□□ 1.3
HERC2-204ENST00000563945 TADA2AO75478 443 aa23.19■■□□□ 1.3
HERC2-204ENST00000563945 LYPLA2O95372 231 aa23.19■■□□□ 1.3
HERC2-204ENST00000563945 SPATA31D3P0C874 917 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms