RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
USB1-208ENST00000563207 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 SLC7A3Q8WY07 619 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 JPH2Q9BR39 696 aaPredicted RBP17.36■□□□□ 0.37
USB1-208ENST00000563207 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 VN1R3Q9BXE9 311 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 CCSER1Q9C0I3 900 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 GBP3Q9H0R5 595 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 S1PR5Q9H228 398 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 PCDHB2Q9Y5E7 798 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 PRR33A8MZF0 331 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 CUTAO60888 179 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 DDHD2O94830 711 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 SP100P23497 879 aaPredicted RBP17.35■□□□□ 0.37
USB1-208ENST00000563207 PLA2G5P39877 138 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 TXLNAP40222 546 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 ANKRD54Q6NXT1 300 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 PIGOQ8TEQ8 1089 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 SUSD6Q92537 303 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 RPGRIP1Q96KN7 1286 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
USB1-208ENST00000563207 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
USB1-208ENST00000563207 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
USB1-208ENST00000563207 DBR1Q9UK59 544 aaKnown RBP17.35■□□□□ 0.37
USB1-208ENST00000563207 C2orf71A6NGG8 1288 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 LOC730098B7Z3J9 87 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 GAS2O43903 313 aaKnown RBP17.34■□□□□ 0.37
USB1-208ENST00000563207 ZNF623O75123 536 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 WEE2P0C1S8 567 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 RFC5P40937 340 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 SLC11A1P49279 550 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 KRT17Q04695 432 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 NOMO2Q5JPE7 1267 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 CABP7Q86V35 215 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 MRPL43Q8N983 215 aaKnown RBP17.34■□□□□ 0.37
USB1-208ENST00000563207 ASAP3Q8TDY4 903 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 PSPC1Q8WXF1 523 aaKnown RBP17.34■□□□□ 0.37
USB1-208ENST00000563207 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 CDK5RAP3Q96JB5 506 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 SPATA32Q96LK8 384 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 CCDC43Q96MW1 224 aaKnown RBP17.34■□□□□ 0.37
USB1-208ENST00000563207 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
USB1-208ENST00000563207 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 KIAA1024Q9UPX6 916 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 DNM3Q9UQ16 869 aa17.34■□□□□ 0.37
USB1-208ENST00000563207 PP2D1A8MPX8 630 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 CLASP2O75122 1294 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 CXCL14O95715 111 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 GALTP07902 379 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 CDC25AP30304 524 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 CA8P35219 290 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 PPM1AP35813 382 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 HFE2Q6ZVN8 426 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 C12orf76Q8N812 135 aaPredicted RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 CDCA3Q99618 268 aaPredicted RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 NGRNQ9NPE2 291 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.36
USB1-208ENST00000563207 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 HES2Q9Y543 173 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.36
USB1-208ENST00000563207 TSPAN1O60635 241 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 DGAT1O75907 488 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 POMCP01189 267 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 ME1P48163 572 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 RARRES1P49788 294 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 GRIN1Q05586 938 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
USB1-208ENST00000563207 GLB1LQ6UWU2 654 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 SRGAP1Q7Z6B7 1085 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 MRPL10Q7Z7H8 261 aaKnown RBP17.32■□□□□ 0.36
USB1-208ENST00000563207 CDR2LQ86X02 465 aaPredicted RBP17.32■□□□□ 0.36
USB1-208ENST00000563207 LEO1Q8WVC0 666 aaPredicted RBP17.32■□□□□ 0.36
USB1-208ENST00000563207 IGSF21Q96ID5 467 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 MTRQ99707 1265 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 MRPL9Q9BYD2 267 aaKnown RBP17.32■□□□□ 0.36
USB1-208ENST00000563207 ZBP1Q9H171 429 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 HCN4Q9Y3Q4 1203 aa17.32■□□□□ 0.36
USB1-208ENST00000563207 F8W810 466 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 EPCAMP16422 314 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 ARL2P36404 184 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 PTENP60484 403 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 CAPSQ13938 189 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 CBX2Q14781 532 aaPredicted RBP17.31■□□□□ 0.36
USB1-208ENST00000563207 ECM1Q16610 540 aa17.31■□□□□ 0.36
USB1-208ENST00000563207 AXDND1Q5T1B0 1012 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms