RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 FAM237AA0A1B0GTK4 181 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 MEIS3P2A8K0S8 358 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 HOXA2O43364 376 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 TFF2Q03403 129 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 AAK1Q2M2I8 961 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 PAN2Q504Q3 1202 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 SLC27A1Q6PCB7 646 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 MRPL10Q7Z7H8 261 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 CDR2LQ86X02 465 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 DDX12PQ92771 950 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 LPPQ93052 612 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 HLA-CQ95604 372 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 DHX58Q96C10 678 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 CASD1Q96PB1 797 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
RABGGTA-219ENST00000560871 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 SLC16A4O15374 487 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 POLR2DO15514 142 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 FAM13AO94988 1023 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 BMP1P13497 986 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 CMA1P23946 247 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 CTNNB1P35222 781 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 PRPF4BQ13523 1007 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 PTPROQ16827 1216 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 DYMQ7RTS9 669 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 IQUBQ8NA54 791 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 MAGEF1Q9HAY2 307 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 HCSTQ9UBK5 93 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 USP20Q9Y2K6 914 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 IPPQ9Y573 584 aa17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 MRPL42Q9Y6G3 142 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-219ENST00000560871 A0A1W2PQ27 194 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 A0A1W2PQ64 194 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 A0A1W2PQD8 194 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 TBKBP1A7MCY6 615 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 K7ERI5 159 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 N4BP3O15049 544 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 PFKFB1P16118 471 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 AGMOQ6ZNB7 445 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 HELQQ8TDG4 1101 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 STAMQ92783 540 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 TRIM9Q9C026 710 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 NXF3Q9H4D5 531 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 TCHHQ07283 1943 aa17.05■□□□□ 0.32
RABGGTA-219ENST00000560871 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 A0A1B0GVL5 298 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 TRAK2O60296 914 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 NPTXRO95502 500 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 LIG1P18858 919 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 KCNQ1P51787 676 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 SMTNP53814 917 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 ATF7IP2Q5U623 682 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 SFR1Q86XK3 245 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 ADAMTS19Q8TE59 1207 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 RSPH1Q8WYR4 309 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 P2RX5Q93086 422 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 PYM1Q9BRP8 204 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 C11orf84Q9BUA3 381 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 LMAN2LQ9H0V9 348 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 ST6GALNAC4Q9H4F1 302 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 CWH43Q9H720 699 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 MYH11P35749 1972 aa17.04■□□□□ 0.32
RABGGTA-219ENST00000560871 ZMYM2Q9UBW7 1377 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 H0YCG3 227 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 K7ENM7 598 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 ABLIM1O14639 778 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 GRM6O15303 877 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 INPPL1O15357 1258 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 ACTN4O43707 911 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 PPP1R37O75864 691 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 PROZP22891 400 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 LONRF3Q496Y0 759 aa17.03■□□□□ 0.32
RABGGTA-219ENST00000560871 TIGD5Q53EQ6 642 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms