RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 IQCA1Q86XH1 822 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 VSIG1Q86XK7 387 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 CREG2Q8IUH2 290 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 SYTL1Q8IYJ3 562 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 BVESQ8NE79 360 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 MGARPQ8TDB4 240 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 LRTOMTQ8WZ04 291 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 MVB12AQ96EY5 273 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 MRGPRX3Q96LB0 322 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 GCM1Q9NP62 436 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 STARD7Q9NQZ5 370 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 PADI4Q9UM07 663 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 CORO2BQ9UQ03 480 aa7.13□□□□□ -1.27
VPS29-210ENST00000552130 RRP7AQ9Y3A4 280 aaKnown RBP7.13□□□□□ -1.27
VPS29-210ENST00000552130 ASXL2Q76L83 1435 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 GOLGA8AA7E2F4 631 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 GOLGA8BA8MQT2 603 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 AQP7O14520 342 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 SEMA7AO75326 666 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 APOA4P06727 396 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 ZBTB48P10074 688 aaPredicted RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 CKMT1AP12532 417 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 TPP2P29144 1249 aaPredicted RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 PDIA3P30101 505 aaKnown RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 HPDP32754 393 aaPredicted RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 MAP4K2Q12851 820 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 TRIM29Q14134 588 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 TIGD5Q53EQ6 642 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 GGT6Q6P531 493 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 NPNTQ6UXI9 565 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 WAPLQ7Z5K2 1190 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 SDCCAG8Q86SQ7 713 aaPredicted RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 ARHGEF25Q86VW2 580 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 CARNMT1Q8N4J0 409 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 ANKRD52Q8NB46 1076 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 CCDC191Q8NCU4 936 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 PHKBQ93100 1093 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 SLC6A18Q96N87 628 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 ANP32EQ9BTT0 268 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 KATNAL1Q9BW62 490 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 GPR62Q9BZJ7 368 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 MAGEH1Q9H213 219 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 PLSCR4Q9NRQ2 329 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 CCM2LQ9NUG4 571 aaPredicted RBP7.12□□□□□ -1.27
VPS29-210ENST00000552130 ABCF3Q9NUQ8 709 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 TBK1Q9UHD2 729 aa7.12□□□□□ -1.27
VPS29-210ENST00000552130 CAPN8A6NHC0 703 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 H7C0S8 307 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 FFAR2O15552 330 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 FOXD2O60548 495 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 MAFO75444 373 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 SKAP2O75563 359 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 SLC3A2P08195 630 aaKnown RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 PARP1P09874 1014 aaKnown RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 NAT1P18440 290 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 ETV3P41162 512 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 TUBP50607 506 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 CNN3Q15417 329 aaKnown RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 PARP10Q53GL7 1025 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 TMEM201Q5SNT2 666 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 APOA5Q6Q788 366 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 MCM10Q7L590 875 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 ADAT2Q7Z6V5 191 aaKnown RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 LRRTM4Q86VH4 590 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 SAMD14Q8IZD0 417 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 CHST14Q8NCH0 376 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 LMBR1Q8WVP7 490 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 N4BP2L2Q92802 583 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 TRIM44Q96DX7 344 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 YTHDC1Q96MU7 727 aaKnown RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 KIAA1683Q9H0B3 1180 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 GBP3Q9H0R5 595 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 C19orf44Q9H6X5 657 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 ZNF552Q9H707 407 aaPredicted RBP7.11□□□□□ -1.27
VPS29-210ENST00000552130 ZWILCHQ9H900 591 aa7.11□□□□□ -1.27
VPS29-210ENST00000552130 TEX51A0A1B0GUA7 166 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 PGPEP1LA6NFU8 196 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 HSPA4LO95757 839 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 GFRA1P56159 465 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 CDC16Q13042 620 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 POLD3Q15054 466 aaPredicted RBP7.1□□□□□ -1.27
VPS29-210ENST00000552130 SF1Q15637 639 aaKnown RBP7.1□□□□□ -1.27
VPS29-210ENST00000552130 CC2D1BQ5T0F9 858 aaKnown RBP7.1□□□□□ -1.27
VPS29-210ENST00000552130 SLC30A6Q6NXT4 461 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 CCDC73Q6ZRK6 1079 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 KDELC2Q7Z4H8 507 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 TRIM59Q8IWR1 403 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 MARCH10Q8NA82 808 aaPredicted RBP7.1□□□□□ -1.27
VPS29-210ENST00000552130 ZMIZ2Q8NF64 920 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 PPP1R13LQ8WUF5 828 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 TIGD1Q96MW7 591 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 BTBD1Q9H0C5 482 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 JMJD4Q9H9V9 463 aa7.1□□□□□ -1.27
VPS29-210ENST00000552130 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
VPS29-210ENST00000552130 YBX2Q9Y2T7 364 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms