RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 C2orf16Q68DN1 1984 aa17.22■□□□□ 0.35
BRF1-220ENST00000552127 PKD1L2Q7Z442 2459 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 DARSP14868 501 aaKnown RBP17.21■□□□□ 0.35
BRF1-220ENST00000552127 DNM2P50570 870 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 CCDC149Q6ZUS6 474 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 C4orf19Q8IY42 314 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 CASD1Q96PB1 797 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
BRF1-220ENST00000552127 TMEM161AQ9NX61 479 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 RGL1Q9NZL6 768 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 SIT1Q9Y3P8 196 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
BRF1-220ENST00000552127 ASPMQ8IZT6 3477 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 POTEMA6NI47 508 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 CXCL14O95715 111 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 NPEPPSP55786 919 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 CYP4A11Q02928 519 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 LMNB2Q03252 620 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 POTEGQ6S5H5 508 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 MAML2Q8IZL2 1156 aaPredicted RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 RSAD2Q8WXG1 361 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 TMEM117Q9H0C3 514 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 TTC12Q9H892 705 aaPredicted RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 SUCLA2Q9P2R7 463 aaPredicted RBP17.2■□□□□ 0.34
BRF1-220ENST00000552127 PCDHA12Q9UN75 941 aa17.2■□□□□ 0.34
BRF1-220ENST00000552127 RFC5P40937 340 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 POLGP54098 1239 aaPredicted RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 FAM189BP81408 668 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 GPR149Q86SP6 731 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 CABP7Q86V35 215 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 RHPN2Q8IUC4 686 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 EXOC8Q8IYI6 725 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 MTMR9Q96QG7 549 aa17.19■□□□□ 0.34
BRF1-220ENST00000552127 EIF2AK1Q9BQI3 630 aaKnown RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 DHX33Q9H6R0 707 aaKnown RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 ELAC1Q9H777 363 aaKnown RBP17.19■□□□□ 0.34
BRF1-220ENST00000552127 A0A087WZ62 844 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.18■□□□□ 0.34
BRF1-220ENST00000552127 GLULP15104 373 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 ZSCAN20P17040 1043 aaPredicted RBP17.18■□□□□ 0.34
BRF1-220ENST00000552127 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 FGFR4P22455 802 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 MCM7P33993 719 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 TXKP42681 527 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
BRF1-220ENST00000552127 PHLDB3Q6NSJ2 640 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 OTUD6AQ7L8S5 288 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 LRRC43Q8N309 656 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 SLC22A17Q8WUG5 538 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
BRF1-220ENST00000552127 TMEM60Q9H2L4 133 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
BRF1-220ENST00000552127 GAS2O43903 313 aaKnown RBP17.17■□□□□ 0.34
BRF1-220ENST00000552127 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
BRF1-220ENST00000552127 SLITRK3O94933 977 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 LYPLA2O95372 231 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRF1-220ENST00000552127 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
BRF1-220ENST00000552127 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
BRF1-220ENST00000552127 EMC2Q15006 297 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 XKR9Q5GH70 373 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 TPH2Q8IWU9 490 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 HSD17B14Q9BPX1 270 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
BRF1-220ENST00000552127 COL4A3BPQ9Y5P4 624 aa17.17■□□□□ 0.34
BRF1-220ENST00000552127 ANKRD11Q6UB99 2663 aaPredicted RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 SPTLC1O15269 473 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 HOXA2O43364 376 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 HOXB3P14651 431 aaPredicted RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 ACAP1Q15027 740 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 PPM1JQ5JR12 505 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 ECHDC2Q86YB7 292 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 SLC44A3Q8N4M1 653 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 GPR152Q8TDT2 470 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 TCP11Q8WWU5 503 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms