RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 PGBD4Q96DM1 585 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 MTRQ99707 1265 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 TMEM60Q9H2L4 133 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
PRPF40B-212ENST00000551111 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 SEC24BO95487 1268 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 SPATA31D3P0C874 917 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 GLRA2P23416 452 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 AKAP5P24588 427 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 KRT2P35908 639 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 ARL2P36404 184 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 MLH1P40692 756 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 SCNN1GP51170 649 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 MBTD1Q05BQ5 628 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 DSC1Q08554 894 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 SPATA31D4Q6ZUB0 917 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 CABP7Q86V35 215 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 TMEM105Q8N8V8 129 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 NXF3Q9H4D5 531 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 USP20Q9Y2K6 914 aa12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-212ENST00000551111 POTEMA6NI47 508 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 H0Y858 1186 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 INO80B-WBP1J3KQ70 363 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 ASAP2O43150 1006 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 ITGA4P13612 1032 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 XBP1P17861 261 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 KLRC2P26717 231 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 TXKP42681 527 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 OR1G1P47890 313 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 PTPN5P54829 565 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 GPR149Q86SP6 731 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 SLFN12Q8IYM2 578 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 FAM193BQ96PV7 902 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 TMEM175Q9BSA9 504 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 DZANK1Q9NVP4 752 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
PRPF40B-212ENST00000551111 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 INPPL1O15357 1258 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 TEX28O15482 410 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 RFPL2O75678 378 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 ERLIN2O94905 339 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 LYPLA2O95372 231 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 SOD2P04179 222 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 EDN1P05305 212 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 RARRES1P49788 294 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 GIT2Q14161 759 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 CALCRLQ16602 461 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 RPS6KC1Q96S38 1066 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms