RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GUCY1A3Q02108 690 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 EXOSC9Q06265 439 aaKnown RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 SF3B3Q15393 1217 aaKnown RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 SKOR2Q2VWA4 1001 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PAN2Q504Q3 1202 aaKnown RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PARP10Q53GL7 1025 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 FAM26FQ5R3K3 315 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PRAMEF18Q5VWM3 479 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PCDH19Q8TAB3 1148 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 SH3RF2Q8TEC5 729 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 FAM89AQ96GI7 184 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 PSMD1Q99460 953 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 TAOK3Q9H2K8 898 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 DBF4Q9UBU7 674 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 NUB1Q9Y5A7 615 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 MYO5AQ9Y4I1 1855 aaKnown RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 ARVCFO00192 962 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 WNT9AO14904 365 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 DDNO94850 711 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 EPHA5P54756 1037 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 TWISTNBQ3B726 338 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 CCDC93Q567U6 631 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 SREK1Q8WXA9 508 aaKnown RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 KAZALD1Q96I82 304 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 GPR101Q96P66 508 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 UTP14AQ9BVJ6 771 aaKnown RBP6.22□□□□□ -1.41
SCAF11-214ENST00000550893 CD244Q9BZW8 370 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 PCDHA9Q9Y5H5 950 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 BRCA2P51587 3418 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 SH3TC1Q8TE82 1336 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 PASKQ96RG2 1323 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 CDHR2Q9BYE9 1310 aa6.22□□□□□ -1.41
SCAF11-214ENST00000550893 PI4KAP2A4QPH2 592 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 MROH6A6NGR9 719 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 CRTAMO95727 393 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 CELA3BP08861 270 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 SRGAP2CP0DJJ0 459 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 HSPA6P17066 643 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 IARSP41252 1262 aaKnown RBP6.21□□□□□ -1.42
SCAF11-214ENST00000550893 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
SCAF11-214ENST00000550893 EPHA10Q5JZY3 1008 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 PHF19Q5T6S3 580 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 VASNQ6EMK4 673 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 WDR63Q8IWG1 891 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 PI4KAP1Q8N8J0 262 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 JMYQ8N9B5 988 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 DTX3Q8N9I9 347 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 ZCCHC14Q8WYQ9 949 aaKnown RBP6.21□□□□□ -1.42
SCAF11-214ENST00000550893 FBXW5Q969U6 566 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 MYD88Q99836 296 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 BDH2Q9BUT1 245 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 HYPKQ9NX55 129 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 POLLQ9UGP5 575 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 ATP6V0A2Q9Y487 856 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 CDK5RAP2Q96SN8 1893 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 CENPFP49454 3210 aa6.21□□□□□ -1.42
SCAF11-214ENST00000550893 ACOT7O00154 380 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 TOMM70O94826 608 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 PCCAP05165 728 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 CKMP06732 381 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 PYGMP11217 842 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 KLRK1P26718 216 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 PLP2Q04941 152 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 KIAA2012Q0VF49 1180 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 GRAPQ13588 217 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 ERICH6BQ5W0A0 696 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 CD276Q5ZPR3 534 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 ARHGAP36Q6ZRI8 547 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 GRAPLQ8TC17 118 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 LCORQ96JN0 433 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 YTHDC1Q96MU7 727 aaKnown RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 WRNIP1Q96S55 665 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 OSBPL2Q9H1P3 480 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 DLL4Q9NR61 685 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 TRMT112Q9UI30 125 aaKnown RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 CBLCQ9ULV8 474 aa6.2□□□□□ -1.42
SCAF11-214ENST00000550893 COL1A1P02452 1464 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 TNRC18O15417 2968 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-214ENST00000550893 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-214ENST00000550893 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 ANP32CO43423 234 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 CYP7B1O75881 506 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 AMY2AP04746 511 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 CYP1A1P04798 512 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-214ENST00000550893 PDE6AP16499 860 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 NAT1P18440 290 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 AMY2BP19961 511 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 GPSM2P81274 684 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
SCAF11-214ENST00000550893 GPR19Q15760 415 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms