RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HES2Q9Y543 173 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 VCANP13611 3396 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 CITO14578 2027 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 CCDC169A6NNP5 214 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 ACKR2O00590 384 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 PLCG1P19174 1290 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 KCNA5P22460 613 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 MARCKSP29966 332 aaPredicted RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 IRS1P35568 1242 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 NPTX2P47972 431 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 PEX3P56589 373 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 CEBPZQ03701 1054 aaKnown RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 HYAL1Q12794 435 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 PDE12Q6L8Q7 609 aaKnown RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 CDR2LQ86X02 465 aaPredicted RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 PABPC5Q96DU9 382 aaKnown RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 USP28Q96RU2 1077 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 ADPGKQ9BRR6 497 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 APOL6Q9BWW8 343 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 GBP3Q9H0R5 595 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 PDZD7Q9H5P4 517 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 KANSL3Q9P2N6 904 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 FBXO2Q9UK22 296 aaPredicted RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 MORC2Q9Y6X9 1032 aaPredicted RBP19■□□□□ 0.63
CHMP1A-208ENST00000550102 TRIP11Q15643 1979 aa19■□□□□ 0.63
CHMP1A-208ENST00000550102 INPPL1O15357 1258 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 TXLNAP40222 546 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 MLH1P40692 756 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 KCNQ1P51787 676 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 RAD51AP2Q09MP3 1159 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 KARSQ15046 597 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 TMEM169Q96HH4 297 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 CCSER1Q9C0I3 900 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 ENTPD7Q9NQZ7 604 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 ARHGAP28Q9P2N2 729 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 GIT1Q9Y2X7 761 aa18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 SRPRBQ9Y5M8 271 aaKnown RBP18.99■□□□□ 0.63
CHMP1A-208ENST00000550102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 ARL5CA6NH57 179 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 TTLL13PA6NNM8 815 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 K7ERI5 159 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 POMCP01189 267 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 DCAF4L1Q3SXM0 396 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 EP400NLQ6ZTU2 488 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 APBB1IPQ7Z5R6 666 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 ADGRD2Q7Z7M1 963 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 GPBP1Q86WP2 473 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 MICAL1Q8TDZ2 1067 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 ADAMTS19Q8TE59 1207 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 ZFP42Q96MM3 310 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 FAM193BQ96PV7 902 aaPredicted RBP18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 GAD1Q99259 594 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 TCF25Q9BQ70 676 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 DNAJB4Q9UDY4 337 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 PCDHGC5Q9Y5F6 944 aa18.98■□□□□ 0.63
CHMP1A-208ENST00000550102 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 FSD2A1L4K1 749 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 FSCN2O14926 492 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 B4GALT3O60512 393 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 EDN1P05305 212 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 PLS3P13797 630 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 SLC11A1P49279 550 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 NASPP49321 788 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 AFF1P51825 1210 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 SLC39A14Q15043 492 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 LEXMQ3ZCV2 418 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 ATF7IP2Q5U623 682 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 PLPP4Q5VZY2 271 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 ZNF280BQ86YH2 543 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 SPIRE2Q8WWL2 714 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 RAD54LQ92698 747 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 KCNG1Q9UIX4 513 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 ODF2LQ9ULJ1 636 aa18.97■□□□□ 0.63
CHMP1A-208ENST00000550102 NT5C1B-RDH14C9J2C7 533 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 GALTP07902 379 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 ZSCAN22P10073 491 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 AKAP5P24588 427 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 NRIP1P48552 1158 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 SCNN1GP51170 649 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 SMTNP53814 917 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 ERVFC1P60507 584 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 STK38Q15208 465 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 CTC1Q2NKJ3 1217 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 TMEM173Q86WV6 379 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 EFHBQ8N7U6 833 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 LRRC15Q8TF66 581 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 IGSF21Q96ID5 467 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 EPSTI1Q96J88 318 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 RPS6KC1Q96S38 1066 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 REEP2Q9BRK0 252 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms