RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 TREHO43280 583 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 CALUO43852 315 aaPredicted RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 SERPINC1P01008 464 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 PIGRP01833 764 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 VTNP04004 478 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 ASGR1P07306 291 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 NR2F2P24468 414 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 EEF1GP26641 437 aaKnown RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 CDC25BP30305 580 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 COPB1P53618 953 aaKnown RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 MARSP56192 900 aaKnown RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 UBASH3AP57075 661 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 CCDC173Q0VFZ6 552 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 MXD4Q14582 209 aaPredicted RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 PTPN21Q16825 1174 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 MIIPQ5JXC2 388 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 NFRKBQ6P4R8 1299 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 FILIP1Q7Z7B0 1213 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 RHPN2Q8IUC4 686 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 C12orf56Q8IXR9 622 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 KIAA0319LQ8IZA0 1049 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 RNF149Q8NC42 400 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 RETREG2Q8NC44 543 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 ARMC5Q96C12 935 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 MRFAP1L1Q96HT8 127 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 NLRP4Q96MN2 994 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 PPP1R16BQ96T49 567 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 CBWD1Q9BRT8 395 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 UNC93B1Q9H1C4 597 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 TMEM206Q9H813 350 aa8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
DEPDC4-207ENST00000549249 A0A087WZ62 844 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SMIM35A0A1B0GVV1 85 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 C17orf102A2RUQ5 167 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 H0YCG3 227 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 ASAP2O43150 1006 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 ZEB2O60315 1214 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 MSCO60682 206 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 AKAP3O75969 853 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SRGAP2CP0DJJ0 459 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 CDK11BP21127 795 aaKnown RBP8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 ADSSP30520 456 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 PBX1P40424 430 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 CYP2J2P51589 502 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 GPC3P51654 580 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 PTENP60484 403 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SPAG1Q07617 926 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 ADAM9Q13443 819 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 NR1I3Q14994 352 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 MTFR1Q15390 333 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SLC9C1Q4G0N8 1177 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SLC9A9Q8IVB4 645 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 FAM114A1Q8IWE2 563 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 SYCP3Q8IZU3 236 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 TMEM174Q8WUU8 243 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 BORCS6Q96GS4 357 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 CTAGE1Q96RT6 745 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 PHOX2BQ99453 314 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 FDXACB1Q9BRP7 624 aaPredicted RBP8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 TUBGCP2Q9BSJ2 902 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 PRKD2Q9BZL6 878 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 HAPLN2Q9GZV7 340 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 VPS16Q9H269 839 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 MINDY3Q9H8M7 445 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 IFT122Q9HBG6 1241 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 GTF2IRD1Q9UHL9 959 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 AKT3Q9Y243 479 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 TRIP11Q15643 1979 aa8.86□□□□□ -0.99
DEPDC4-207ENST00000549249 LGALS16A8MUM7 142 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 K7ERI5 159 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ABLIM1O14639 778 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CETN3O15182 167 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 SLC16A3O15427 465 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 FGFR1OPO95684 399 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 PRKCBP05771 671 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 IQCF3P0C7M6 154 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CYP2C9P11712 490 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 TMOD1P28289 359 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 MTIF2P46199 727 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 DNM2P50570 870 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ACLYP53396 1101 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 SNRPFP62306 86 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 MBTD1Q05BQ5 628 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 POU5F1BQ06416 359 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 TFDP1Q14186 410 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 AMHR2Q16671 573 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 MAN2A1Q16706 1144 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CEP135Q66GS9 1140 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ARMCX5Q6P1M9 558 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 RNF180Q86T96 592 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 SESTD1Q86VW0 696 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 TRIM59Q8IWR1 403 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms