RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DNAAF5Q86Y56 855 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 MYOCDQ8IZQ8 938 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 CCDC127Q96BQ5 260 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 TRIM51Q9BSJ1 452 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 MMTAG2Q9BU76 263 aaKnown RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 OSBPL1AQ9BXW6 950 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 CELF4Q9BZC1 486 aaKnown RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 CPVLQ9H3G5 476 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 HOMER3Q9NSC5 361 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 AIPL1Q9NZN9 384 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ARPP21Q9UBL0 812 aaPredicted RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 SERPINB13Q9UIV8 391 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 C2CD2Q9Y426 696 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 PCDHAC2Q9Y5I4 1007 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.61□□□□□ -1.51
PROM1-220ENST00000540805 FOXO6A8MYZ6 492 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 STXBP3O00186 592 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 LIN7AO14910 233 aaPredicted RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 SLURP2P0DP57 97 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ITGA4P13612 1032 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ALADP13716 330 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ALDH5A1P51649 535 aaPredicted RBP5.61□□□□□ -1.51
PROM1-220ENST00000540805 ZNF131P52739 623 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 NCALDP61601 193 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 STRN3Q13033 797 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 GRB10Q13322 594 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 GRM4Q14833 912 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SEPT2Q15019 361 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SUPT20HL1Q3ZLR7 823 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SEPT14Q6ZU15 432 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SPATA21Q7Z572 469 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 NEK8Q86SG6 692 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SYCE1Q8N0S2 351 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 RASGEF1CQ8N431 466 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 LRRC57Q8N9N7 239 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 SEC14L1Q92503 715 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ZMYND12Q9H0C1 365 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ECT2Q9H8V3 914 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 RMI1Q9H9A7 625 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 BLOC1S4Q9NUP1 217 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 ABCF3Q9NUQ8 709 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 BARHL2Q9NY43 387 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 DNM3Q9UQ16 869 aa5.61□□□□□ -1.51
PROM1-220ENST00000540805 NPHP3-ACAD11A0A0J9YXS1 232 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 SMIM23A6NLE4 172 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 UBOX5O94941 541 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 LUC7L3O95232 432 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 GCNT3O95395 438 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 GNA14O95837 355 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 NUDT17P0C025 328 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 TNNI1P19237 187 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 LACTBP83111 547 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 RASA3Q14644 834 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CALCRLQ16602 461 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 XKR9Q5GH70 373 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CWF19L1Q69YN2 538 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 C16orf86Q6ZW13 317 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 GSTA5Q7RTV2 222 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CROCCP2Q86T23 111 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 FBXO11Q86XK2 927 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CCDC117Q8IWD4 279 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PGM2Q96G03 612 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CEP63Q96MT8 703 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 TSC22D3Q99576 134 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PRMT1Q99873 361 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 STMN4Q9H169 189 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 GANQ9H2C0 597 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 SPON1Q9HCB6 807 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 RHBDL2Q9NX52 303 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 NKX1-2Q9UD57 310 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 FRMD4BQ9Y2L6 1034 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 USP17L3A6NCW0 530 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 USP17L4A6NCW7 530 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 IGF2BP3O00425 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
PROM1-220ENST00000540805 AGTP01019 485 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 KCNA3P22001 575 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PTGER2P43116 358 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PMS2P54278 862 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 MRPS9P82933 396 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 NFX1Q12986 1120 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 AOC3Q16853 763 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 UBAP2Q5T6F2 1119 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 NUGGCQ68CJ6 796 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 USP17L2Q6R6M4 530 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 USP17L1Q7RTZ2 530 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CCDC25Q86WR0 208 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 RAD54LQ92698 747 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 KLHL29Q96CT2 875 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 CCDC134Q9H6E4 229 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 DNAJC18Q9H819 358 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 AS3MTQ9HBK9 375 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 SUCLA2Q9P2R7 463 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 CORO1CQ9ULV4 474 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 CD2APQ9Y5K6 639 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms