RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RCAN3Q9UKA8 241 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 LHX6Q9UPM6 363 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 AKAP13Q12802 2813 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 IPO5O00410 1097 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 POMCP01189 267 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 CCR3P51677 355 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 DRP2Q13474 957 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 SART3Q15020 963 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 SF3A2Q15428 464 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 ZNF746Q6NUN9 644 aaPredicted RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 GLYCTKQ8IVS8 523 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 ZNF654Q8IZM8 581 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 IGDCC4Q8TDY8 1250 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 B3GALT6Q96L58 329 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 ANO3Q9BYT9 981 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 ASH1LQ9NR48 2969 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 FNIP2Q9P278 1114 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 SDK1Q7Z5N4 2213 aa15.66■□□□□ 0.1
NKX3-1-202ENST00000523261 TMEM8BA6NDV4 472 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 F8W810 466 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 ZNF862O60290 1169 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 DDAH1O94760 285 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 PSAPP07602 524 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 SREBF1P36956 1147 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 GNAQP50148 359 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 STPG1Q5TH74 334 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 COLGALT2Q8IYK4 626 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 GPR65Q8IYL9 337 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 FAM160A2Q8N612 972 aaPredicted RBP15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 LSM14BQ9BX40 385 aaKnown RBP15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 WASF3Q9UPY6 502 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 PCDHA10Q9Y5I2 948 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 ITPR1Q14643 2758 aa15.65■□□□□ 0.1
NKX3-1-202ENST00000523261 WDFY3Q8IZQ1 3526 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 IGLV3-22A0A075B6J6 115 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 A0A087WZ62 844 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 CHURC1-FNTBB4DL54 471 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FAM86B1E9PN63 330 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FOSP01100 380 aaPredicted RBP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 OATP04181 439 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 HNRNPA1P09651 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FAM86B2P0C5J1 330 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 RPL17P18621 184 aaKnown RBP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 CNR2P34972 360 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 OR1G1P47890 313 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FNTBP49356 437 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 ANTXR2P58335 489 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 SATB1Q01826 763 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 HEATR3Q7Z4Q2 680 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 NPAS3Q8IXF0 933 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 NOTCH4Q99466 2003 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FDXACB1Q9BRP7 624 aaPredicted RBP15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 PLA2G2FQ9BZM2 168 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 IL25Q9H293 177 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 FBXW11Q9UKB1 542 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 CNTNAP2Q9UHC6 1331 aa15.64■□□□□ 0.09
NKX3-1-202ENST00000523261 DMXL2Q8TDJ6 3036 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 TAF4O00268 1085 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 ECI2O75521 394 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 ZNF76P36508 570 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 CXCL12P48061 93 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 CDC42EP1Q00587 391 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 DSC1Q08554 894 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 PSAPL1Q6NUJ1 521 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 CATSPER4Q7RTX7 472 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 RALYLQ86SE5 291 aaKnown RBP15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 C12orf50Q8NA57 414 aaPredicted RBP15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 DNASE1L2Q92874 299 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 NRBP2Q9NSY0 501 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 TBC1D22BQ9NU19 505 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 TAF6LQ9Y6J9 622 aa15.63■□□□□ 0.09
NKX3-1-202ENST00000523261 MAN2B1O00754 1011 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 CCL16O15467 120 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 CYP21A2P08686 494 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 ZNF806P0C7X5 589 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 HOXA9P31269 272 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 PRKCEQ02156 737 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 TARBP2Q15633 366 aaKnown RBP15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 TYW1BQ6NUM6 668 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 ZNF410Q86VK4 478 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 TEX2Q8IWB9 1127 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 GATA6Q92908 595 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 ADAM33Q9BZ11 813 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 GPR62Q9BZJ7 368 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 INO80BQ9C086 356 aaPredicted RBP15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 LMAN1LQ9HAT1 526 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 AGPAT5Q9NUQ2 364 aa15.62■□□□□ 0.09
NKX3-1-202ENST00000523261 MAST4O15021 2626 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 COL4A2P08572 1712 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 HIP1O00291 1037 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms