RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PGBD1Q96JS3 809 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC9A2Q9UBY0 812 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 TRAF3IP3Q9Y228 551 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 A0A0G2JND7 137 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 CCDC159P0C7I6 412 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 KCNA3P22001 575 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 KCNA4P22459 653 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 GUCY1A3Q02108 690 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 HIPK4Q8NE63 616 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAML1Q92585 1016 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 THAP11Q96EK4 314 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 GBA2Q9HCG7 927 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 DDX28Q9NUL7 540 aaKnown RBP13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GSTA1P08263 222 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GSTA2P09210 222 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 IRAK1P51617 712 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 EPHA7Q15375 998 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 TEKT4Q8WW24 435 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 PRDM5Q9NQX1 630 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GNGT2O14610 69 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 SERPINB3P29508 390 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 PEX3P56589 373 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 PSMC1P62191 440 aaKnown RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 DNAJC24Q6P3W2 148 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GSPT2Q8IYD1 628 aaKnown RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GLT1D1Q96MS3 346 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 POLR3CQ9BUI4 534 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 ASAP2O43150 1006 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GYS1P13807 737 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 AKR1B1P15121 316 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 BARHL2Q9NY43 387 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 LZTS1Q9Y250 596 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 INPP5FQ9Y2H2 1132 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 GSG1L2A8MUP6 293 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 DAB1O75553 588 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 APOA1P02647 267 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 AGGF1Q8N302 714 aaeCLIP13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 OR6B3Q8NGW1 331 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 SEPT1Q8WYJ6 367 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
PCDHGA6-201ENST00000517434 CFLARO15519 480 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 HDAC4P56524 1084 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 LONP2Q86WA8 852 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 DNAJC9Q8WXX5 260 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 FAM161BQ96MY7 647 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAD1L1Q9Y6D9 718 aa13.02□□□□□ -0.32
PCDHGA6-201ENST00000517434 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 WDR91A4D1P6 747 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 MEIS1O00470 390 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 SERPING1P05155 500 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 HOXC6P09630 235 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 SERPINB4P48594 390 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 TRPC1P48995 793 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 MED21Q13503 144 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 SEPT8Q92599 483 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZNF653Q96CK0 615 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 FAM96AQ9H5X1 160 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 FLT1P17948 1338 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 MST1RQ04912 1400 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 PLCG1P19174 1290 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 STAT5BP51692 787 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 XXYLT1Q8NBI6 393 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 FAM8A1Q9UBU6 413 aa13.02□□□□□ -0.33
PCDHGA6-201ENST00000517434 H7C0C1 242 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ESRRBO95718 433 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ATP5OP48047 213 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms