RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 SH3D21A4FU49 640 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 FAM171A2A8MVW0 826 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 H3BML4 177 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 RFXAPO00287 272 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 ALDH1A2O94788 518 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 UBXN7O94888 489 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 TRIM27P14373 513 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 CSF2RBP32927 897 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 SLC6A9P48067 706 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 SESN2P58004 480 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 RHBDL3P58872 404 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 DSC2Q02487 901 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 UBE4AQ14139 1066 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 VMACQ2NL98 169 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 COBLL1Q53SF7 1204 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 ZNF648Q5T619 568 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 CYB5RLQ6IPT4 315 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 REXO1L1PQ8IX06 675 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 CARFQ8N187 725 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 PLA2G15Q8NCC3 412 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 DACT3Q96B18 629 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 CGRRF1Q99675 332 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 PCGF6Q9BYE7 350 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 BARX1Q9HBU1 254 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 MAN1C1Q9NR34 630 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 ZDHHC9Q9Y397 364 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-207ENST00000513819 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
NIPBL-207ENST00000513819 LRRC14BA6NHZ5 514 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 TPP1O14773 563 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 B3GALT2O43825 422 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 PHF2O75151 1096 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 TUSC2O75896 110 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 ECHS1P30084 290 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 PER3P56645 1201 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 LINC00310P59036 64 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 PURAQ00577 322 aaKnown RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 USP10Q14694 798 aaKnown RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 ZNF385BQ569K4 471 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 C19orf54Q5BKX5 351 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 AGBL4Q5VU57 503 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 CHST15Q7LFX5 561 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 DRC7Q8IY82 874 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 CCHCR1Q8TD31 782 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 ADAMTS17Q8TE56 1095 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 PPP1R16BQ96T49 567 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 LRFN3Q9BTN0 628 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 LDAHQ9H6V9 325 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 ADAM29Q9UKF5 820 aa5.54□□□□□ -1.52
NIPBL-207ENST00000513819 CFAP20Q9Y6A4 193 aaKnown RBP5.54□□□□□ -1.52
NIPBL-207ENST00000513819 APAF1O14727 1248 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 ADCY6O43306 1168 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TOX4O94842 621 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 ENDOD1O94919 500 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 FTLP02792 175 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 SYN1P17600 705 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 HTR1BP28222 390 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 KIR2DL3P43628 341 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 MAP2K6P52564 334 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 ATP2C1P98194 919 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 CAP1Q01518 475 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TBR1Q16650 682 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 ERICH6BQ5W0A0 696 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 IL31Q6EBC2 164 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 PPP4R3AQ6IN85 833 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 PQLC1Q8N2U9 271 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 KLHL36Q8N4N3 616 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 FAM156AQ8NDB6 213 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 FBXO18Q8NFZ0 1043 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 PJA1Q8NG27 643 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 OR14K1Q8NGZ2 314 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 ZNF480Q8WV37 535 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 RGMAQ96B86 450 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 CLPTM1LQ96KA5 538 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 UHRF1Q96T88 793 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 SLC38A3Q99624 504 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 B3GNT5Q9BYG0 378 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 OR10A2Q9H208 303 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 FAM204AQ9H8W3 233 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 C14orf93Q9H972 538 aaKnown RBP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TDP1Q9NUW8 608 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-207ENST00000513819 TRPS1Q9UHF7 1281 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 NR2E3Q9Y5X4 410 aa5.53□□□□□ -1.52
NIPBL-207ENST00000513819 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 NBPF7P0C2Y1 421 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 RHCEP18577 417 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 SREBF1P36956 1147 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms