RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FAM157BP0CG42 384 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ZBTB48P10074 688 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MTHFD1P11586 935 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ATP1A3P13637 1013 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 SELPP16109 830 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ENPP1P22413 925 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CD40P25942 277 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ATP5DP30049 168 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 SERPINF1P36955 418 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ANP32AP39687 249 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 LIFRP42702 1097 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MSH2P43246 934 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TNNT3P45378 269 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 HSPA7P48741 367 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MTNR1BP49286 362 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 DNM2P50570 870 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TUBP50607 506 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PDE6CP51160 858 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF132P52740 706 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MRPS9P82933 396 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 LSM11P83369 360 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MTA1Q13330 715 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 DAG1Q14118 895 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 KRT32Q14532 448 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 FSCN1Q16658 493 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 KIZQ2M2Z5 673 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MPEG1Q2M385 716 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 C5orf22Q49AR2 442 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PKDCCQ504Y2 493 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC157Q569K6 752 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 METTL24Q5JXM2 366 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 C6orf118Q5T5N4 469 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 NUGGCQ68CJ6 796 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 C11orf88Q6PI97 169 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 LMBR1LQ6UX01 489 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 LBX2Q6XYB7 198 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 BTN2A1Q7KYR7 527 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 SUPT6HQ7KZ85 1726 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 LYSMD3Q7Z3D4 306 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PRICKLE2Q7Z3G6 844 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC91Q7Z6B0 441 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 HEATR4Q86WZ0 1026 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 UNC45BQ8IWX7 931 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TCP11L2Q8N4U5 519 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ATG16L2Q8NAA4 619 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ADCY4Q8NFM4 1077 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TDRD7Q8NHU6 1098 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 KLHDC4Q8TBB5 520 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ZNF507Q8TCN5 953 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 SPPL3Q8TCT6 385 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 DPF3Q92784 378 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ITPKCQ96DU7 683 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 RAX2Q96IS3 184 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CNDP2Q96KP4 475 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CCDC43Q96MW1 224 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 EYA3Q99504 573 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PTPN18Q99952 460 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PHF20Q9BVI0 1012 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 BOCQ9BWV1 1114 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 SORBS1Q9BX66 1292 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 STK33Q9BYT3 514 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TXLNGYQ9BZA5 131 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 GHITMQ9H3K2 345 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 GRPEL1Q9HAV7 217 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 XAB2Q9HCS7 855 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 VPS45Q9NRW7 570 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 TM7SF3Q9NS93 570 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PRR13Q9NZ81 148 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 H2AFY2Q9P0M6 372 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 USP36Q9P275 1121 aaKnown RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 RASAL2Q9UJF2 1139 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 GDF2Q9UK05 429 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 OGDHLQ9ULD0 1010 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 C19orf53Q9UNZ5 99 aaPredicted RBP3.23□□□□□ -1.89
HMGN4-202ENST00000477243 HIF3AQ9Y2N7 669 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 PCDHB12Q9Y5F1 795 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CELSR3Q9NYQ7 3312 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 BRWD3Q6RI45 1802 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 ZFYVE16Q7Z3T8 1539 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 CNTNAP1P78357 1384 aa3.23□□□□□ -1.89
HMGN4-202ENST00000477243 MAGI2Q86UL8 1455 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RPTORQ8N122 1335 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ABCC5O15440 1437 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SLC12A8A0AV02 714 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 FIGNL2A6NMB9 653 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 DCDC2CA8MYV0 355 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 FAM47E-STBD1D6RA91 191 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 J3QW42 95 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SYT5O00445 386 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ATXN7O15265 892 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SLC16A6O15403 523 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 MEFVO15553 781 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SPINT1O43278 529 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 EFSO43281 561 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 AHCYL1O43865 530 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 DOK2O60496 412 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TSPAN3O60637 253 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RTN3O95197 1032 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 HSPA4LO95757 839 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms