RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
USP11-206ENST00000469080 MTMR8Q96EF0 704 aa13.26□□□□□ -0.29
USP11-206ENST00000469080 ZNF570Q96NI8 536 aa13.26□□□□□ -0.29
USP11-206ENST00000469080 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
USP11-206ENST00000469080 TOPORSQ9NS56 1045 aaPredicted RBP13.26□□□□□ -0.29
USP11-206ENST00000469080 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
USP11-206ENST00000469080 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 GJA8P48165 433 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 RNF168Q8IYW5 571 aaPredicted RBP13.25□□□□□ -0.29
USP11-206ENST00000469080 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 EPN3Q9H201 632 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 SALL4Q9UJQ4 1053 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 ATXN2Q99700 1313 aaKnown RBP13.25□□□□□ -0.29
USP11-206ENST00000469080 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
USP11-206ENST00000469080 SRGAP2CP0DJJ0 459 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 SREBF1P36956 1147 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 STAT1P42224 750 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 CNTN2Q02246 1040 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 SPRED3Q2MJR0 410 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 PASD1Q8IV76 773 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 GALNT15Q8N3T1 639 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 LRRC1Q9BTT6 524 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
USP11-206ENST00000469080 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 DNAJC12Q9UKB3 198 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 USTQ9Y2C2 406 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 TLDC2A0PJX2 215 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 RASSF10A6NK89 507 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 CCDC25Q86WR0 208 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 KAT5Q92993 513 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
USP11-206ENST00000469080 PGK2P07205 417 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 UCHL3P15374 230 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 ACOT2P49753 483 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 SLC12A3P55017 1021 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 DLG4P78352 724 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 MESDQ14696 234 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 ODF2Q5BJF6 829 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 PDXDC1Q6P996 788 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 ELOA2Q8IYF1 753 aaPredicted RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 ETNPPLQ8TBG4 499 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 DPPA5A6NC42 116 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 PFDN1O60925 122 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 PDHA1P08559 390 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 DESP17661 470 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 SCTRP47872 440 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 TMEM119Q4V9L6 283 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 NUGGCQ68CJ6 796 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 WDR93Q6P2C0 686 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 SYT2Q8N9I0 419 aaPredicted RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 MYCBPAPQ8TBZ2 947 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 NAP1L4Q99733 375 aaKnown RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 SH3GL2Q99962 352 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
USP11-206ENST00000469080 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
USP11-206ENST00000469080 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 EVI5O60447 810 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 HSF2BPO75031 334 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 EYA4O95677 639 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 VIL1P09327 827 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 ZNF24P17028 368 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 PSMC2P35998 433 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 MYL7Q01449 175 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 UGCGQ16739 394 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 TBC1D1Q86TI0 1168 aaPredicted RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 DDX42Q86XP3 938 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP11-206ENST00000469080 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 GALNT8Q9NY28 637 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 USP14P54578 494 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 CETN1Q12798 172 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 SFSWAPQ12872 951 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 NNTQ13423 1086 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 DRP2Q13474 957 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 MYBPC3Q14896 1274 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 TAF11Q15544 211 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 FAM213AQ9BRX8 229 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 DMGDHQ9UI17 866 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 A0A1W2PQC6 194 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms