RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 MAPK7Q13164 816 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 CAPSQ13938 189 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 BTG3Q14201 252 aaPredicted RBP21.13■□□□□ 0.97
USP11-205ENST00000467378 DAW1Q8N136 415 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 NLRP4Q96MN2 994 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 TIPINQ9BVW5 301 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 GCOM2Q9BZD3 368 aaPredicted RBP21.13■□□□□ 0.97
USP11-205ENST00000467378 TLR9Q9NR96 1032 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 PADI3Q9ULW8 664 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 HPSEQ9Y251 543 aa21.13■□□□□ 0.97
USP11-205ENST00000467378 NPHP3-ACAD11A0A0J9YXS1 232 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 A0A1B0GVL5 298 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 POLR2DO15514 142 aaKnown RBP21.12■□□□□ 0.97
USP11-205ENST00000467378 HIP1RO75146 1068 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 RPS6KA5O75582 802 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 CBX2Q14781 532 aaPredicted RBP21.12■□□□□ 0.97
USP11-205ENST00000467378 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 GPBP1Q86WP2 473 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 RNF149Q8NC42 400 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 SMRP1Q8NCR6 262 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 BSNDQ8WZ55 320 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 KIFAP3Q92845 792 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 CLP1Q92989 425 aaKnown RBP21.12■□□□□ 0.97
USP11-205ENST00000467378 ERVK-5Q9HDB9 667 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 CLEC1BQ9P126 229 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 KCNH3Q9ULD8 1083 aa21.12■□□□□ 0.97
USP11-205ENST00000467378 PLXNA4Q9HCM2 1894 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 PFKFB1P16118 471 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 PTENP60484 403 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 RAD51AP2Q09MP3 1159 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 TFDP1Q14186 410 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 SV2BQ7L1I2 683 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 ADGRD2Q7Z7M1 963 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 IFNLR1Q8IU57 520 aaPredicted RBP21.11■□□□□ 0.97
USP11-205ENST00000467378 EFHBQ8N7U6 833 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 IQUBQ8NA54 791 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 DHX58Q96C10 678 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 SCLT1Q96NL6 688 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 PHF7Q9BWX1 381 aaPredicted RBP21.11■□□□□ 0.97
USP11-205ENST00000467378 PLVAPQ9BX97 442 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 CUEDC2Q9H467 287 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 ST3GAL5Q9UNP4 418 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 PLAGL2Q9UPG8 496 aa21.11■□□□□ 0.97
USP11-205ENST00000467378 USP15Q9Y4E8 981 aaPredicted RBP21.11■□□□□ 0.97
USP11-205ENST00000467378 CACNA1AO00555 2505 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 GPR182O15218 404 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 CSDE1O75534 798 aaKnown RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 NFX1Q12986 1120 aaKnown RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 COASYQ13057 564 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 PAK2Q13177 524 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 CAMK1Q14012 370 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 GIT2Q14161 759 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 SRGAP1Q7Z6B7 1085 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 RBM23Q86U06 439 aaKnown RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 ASIC4Q96FT7 647 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 DRC1Q96MC2 740 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 NFKBIZQ9BYH8 718 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 INO80BQ9C086 356 aaPredicted RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 MINDY3Q9H8M7 445 aa21.1■□□□□ 0.97
USP11-205ENST00000467378 RC3H2Q9HBD1 1191 aaKnown RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 BARX2Q9UMQ3 279 aaPredicted RBP21.1■□□□□ 0.97
USP11-205ENST00000467378 MYMKA6NI61 221 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 SFI1A8K8P3 1242 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 FGFR4P22455 802 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 NRIP1P48552 1158 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
USP11-205ENST00000467378 ODR4Q5SWX8 454 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 ASCL5Q7RTU5 278 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 MRPS27Q92552 414 aaKnown RBP21.09■□□□□ 0.97
USP11-205ENST00000467378 REEP2Q9BRK0 252 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 PYM1Q9BRP8 204 aaKnown RBP21.09■□□□□ 0.97
USP11-205ENST00000467378 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 GOLPH3LQ9H4A5 285 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 KBTBD4Q9NVX7 518 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 ODF2LQ9ULJ1 636 aa21.09■□□□□ 0.97
USP11-205ENST00000467378 FAM186AA6NE01 2351 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 DNAJB1P25685 340 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 NAMPTP43490 491 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 PHKA2P46019 1235 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 NDUFA8P51970 172 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 PPP2R5AQ15172 486 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 TPRNQ4KMQ1 711 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 CLEC17AQ6ZS10 378 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 RTN4RL1Q86UN2 441 aaPredicted RBP21.08■□□□□ 0.97
USP11-205ENST00000467378 FSIP1Q8NA03 581 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 TMEM87AQ8NBN3 555 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 STAMQ92783 540 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 P2RX5Q93086 422 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 ZNF689Q96CS4 500 aaPredicted RBP21.08■□□□□ 0.97
USP11-205ENST00000467378 IFT74Q96LB3 600 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 C17orf75Q9HAS0 396 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 SERTAD1Q9UHV2 236 aa21.08■□□□□ 0.97
USP11-205ENST00000467378 LRRIQ4A6NIV6 560 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 PROB1E7EW31 1015 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 ENPP3O14638 875 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 ITGB1P05556 798 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 PEX3P56589 373 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 CDCA2Q69YH5 1023 aaPredicted RBP21.07■□□□□ 0.96
USP11-205ENST00000467378 FAM43BQ6ZT52 329 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms