RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TMX1Q9H3N1 280 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 FZD8Q9H461 694 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ST6GALNAC4Q9H4F1 302 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 MINDY3Q9H8M7 445 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 SLC28A3Q9HAS3 691 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 POLD4Q9HCU8 107 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 TOPORSQ9NS56 1045 aaPredicted RBP7□□□□□ -1.29
SF3B1-206ENST00000462613 TBC1D7Q9P0N9 293 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 RWDD3Q9Y3V2 267 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 PCDHA11Q9Y5I1 949 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 ANK1P16157 1881 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 UBE4BO95155 1302 aa7□□□□□ -1.29
SF3B1-206ENST00000462613 A0A1B0GUA9 196 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 FRMD3A2A2Y4 597 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 C9IYK1 514 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 KIAA0391O15091 583 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 EIF3DO15371 548 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ZNF623O75123 536 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 NR1I2O75469 434 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GJB5O95377 273 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 NPTXRO95502 500 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 RPN1P04843 607 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ITGA4P13612 1032 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 NMT1P30419 496 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 PPP1R2P41236 205 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 DEFB103AP81534 67 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GTF2BQ00403 316 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 CUL4BQ13620 913 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 BTG3Q14201 252 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 DSC3Q14574 896 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 KCNB1Q14721 858 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 NOLC1Q14978 699 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 SPOUT1Q5T280 376 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 L1TD1Q5T7N2 865 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 RASIP1Q5U651 963 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GLB1LQ6UWU2 654 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 MPZL3Q6UWV2 235 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ZNF720Q7Z2F6 126 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ECHDC2Q86YB7 292 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ELOA2Q8IYF1 753 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 FIBCD1Q8N539 461 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GOLGA5Q8TBA6 731 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 LRRC15Q8TF66 581 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 KCNN1Q92952 543 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 SYAP1Q96A49 352 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 CPB2Q96IY4 423 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GSDMAQ96QA5 445 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 CCDC113Q9H0I3 377 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GOLPH3LQ9H4A5 285 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 AAASQ9NRG9 546 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 CXXC1Q9P0U4 656 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 CGNQ9P2M7 1197 aaKnown RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ANKFY1Q9P2R3 1169 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 PARP2Q9UGN5 583 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 TBX20Q9UMR3 447 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 TNFSF13BQ9Y275 285 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 PCDHB2Q9Y5E7 798 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ADGRA3Q8IWK6 1321 aa6.99□□□□□ -1.29
SF3B1-206ENST00000462613 ZMYM2Q9UBW7 1377 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 COL4A6Q14031 1691 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TMEM265A0A087WTH1 108 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TBKBP1A7MCY6 615 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 B4GALT5O43286 388 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 XPOTO43592 962 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 MGEA5O60502 916 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 LDHAP00338 332 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 MCF2P10911 925 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 HARSP12081 509 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 DNAJB2P25686 324 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 SNRPFP62306 86 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 KMT5BQ4FZB7 885 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 ZNF697Q5TEC3 545 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 PPP2R2DQ66LE6 453 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 ARMCX5Q6P1M9 558 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 MAP4K3Q8IVH8 894 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 GRAMD1CQ8IYS0 662 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 CMTR2Q8IYT2 770 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 LRRC43Q8N309 656 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 ENGASEQ8NFI3 743 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 POMGNT1Q8WZA1 660 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TIFAQ96CG3 184 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 ACO2Q99798 780 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 MSTO1Q9BUK6 570 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TARS2Q9BW92 718 aaKnown RBP6.98□□□□□ -1.29
SF3B1-206ENST00000462613 APOL6Q9BWW8 343 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TMEM117Q9H0C3 514 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 GBP3Q9H0R5 595 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 NUP62CLQ9H1M0 184 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 PRO3102Q9H379 93 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 PDZD7Q9H5P4 517 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 RSAD1Q9HA92 442 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 SLC39A2Q9NP94 309 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms