RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZBTB8OSQ8IWT0 167 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 PRIMPOLQ96LW4 560 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 TRIM6Q9C030 488 aaPredicted RBP20.94■□□□□ 0.94
COL5A1-203ENST00000460264 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 NXF3Q9H4D5 531 aaKnown RBP20.94■□□□□ 0.94
COL5A1-203ENST00000460264 KANSL3Q9P2N6 904 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 A0A1B0GUA9 196 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 C2orf71A6NGG8 1288 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 ARL5CA6NH57 179 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 POMCP01189 267 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 CDC25AP30304 524 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 MLH1P40692 756 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 NAMPTP43490 491 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 FAM187BQ17R55 369 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 KRT79Q5XKE5 535 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 DDX53Q86TM3 631 aaKnown RBP20.93■□□□□ 0.94
COL5A1-203ENST00000460264 CDR2LQ86X02 465 aaPredicted RBP20.93■□□□□ 0.94
COL5A1-203ENST00000460264 VPS52Q8N1B4 723 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 MRPL43Q8N983 215 aaKnown RBP20.93■□□□□ 0.94
COL5A1-203ENST00000460264 MMTAG2Q9BU76 263 aaKnown RBP20.93■□□□□ 0.94
COL5A1-203ENST00000460264 VN1R3Q9BXE9 311 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 ZBP1Q9H171 429 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 C2orf40Q9H1Z8 148 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 FZD8Q9H461 694 aa20.93■□□□□ 0.94
COL5A1-203ENST00000460264 C19orf67A6NJJ6 358 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 NPTXRO95502 500 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 CUL4AQ13619 759 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 PPP2R5AQ15172 486 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
COL5A1-203ENST00000460264 TMEM184AQ6ZMB5 413 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 HACE1Q8IYU2 909 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 DEPTORQ8TB45 409 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 ZFP42Q96MM3 310 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 GAD1Q99259 594 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 TMEM175Q9BSA9 504 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 APOL6Q9BWW8 343 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 CCDC113Q9H0I3 377 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 EPHX3Q9H6B9 360 aa20.92■□□□□ 0.94
COL5A1-203ENST00000460264 TTLL13PA6NNM8 815 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 E9PMD0 336 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 SRGAP2BP0DMP2 458 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 MYH11P35749 1972 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 LLGL2Q6P1M3 1020 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 KIFAP3Q92845 792 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 FAM193BQ96PV7 902 aaPredicted RBP20.91■□□□□ 0.94
COL5A1-203ENST00000460264 KIFC3Q9BVG8 833 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 C1QTNF1Q9BXJ1 281 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 BACH2Q9BYV9 841 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 ZMYM2Q9UBW7 1377 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 GIT1Q9Y2X7 761 aa20.91■□□□□ 0.94
COL5A1-203ENST00000460264 USP15Q9Y4E8 981 aaPredicted RBP20.91■□□□□ 0.94
COL5A1-203ENST00000460264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.9■□□□□ 0.94
COL5A1-203ENST00000460264 PRKCBP05771 671 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 CTSAP10619 480 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 SCNN1GP51170 649 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 DSC1Q08554 894 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 BMS1Q14692 1282 aaKnown RBP20.9■□□□□ 0.94
COL5A1-203ENST00000460264 MAPK6Q16659 721 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 KCNK18Q7Z418 384 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 COLGALT2Q8IYK4 626 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 AUTS2Q8WXX7 1259 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 IFT74Q96LB3 600 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 POP1Q99575 1024 aaKnown RBP20.9■□□□□ 0.94
COL5A1-203ENST00000460264 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 POLD4Q9HCU8 107 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 DNM3Q9UQ16 869 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 IRAK3Q9Y616 596 aa20.9■□□□□ 0.94
COL5A1-203ENST00000460264 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 NRP1O14786 923 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 N4BP3O15049 544 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 CLASP2O75122 1294 aaKnown RBP20.89■□□□□ 0.93
COL5A1-203ENST00000460264 CXCL14O95715 111 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 EDN1P05305 212 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 AKAP5P24588 427 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 CA8P35219 290 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 PRPF4BQ13523 1007 aaKnown RBP20.89■□□□□ 0.93
COL5A1-203ENST00000460264 ARL6IP4Q66PJ3 421 aaKnown RBP20.89■□□□□ 0.93
COL5A1-203ENST00000460264 ANKRD54Q6NXT1 300 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 MARCH5Q9NX47 278 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 MIOSQ9NXC5 875 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 FAN1Q9Y2M0 1017 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 HCFC2Q9Y5Z7 792 aa20.89■□□□□ 0.93
COL5A1-203ENST00000460264 PI4K2BG5E9Z4 385 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 ACKR2O00590 384 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 ALDH2P05091 517 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 LIG1P18858 919 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 EFNA5P52803 228 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 GIT2Q14161 759 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 HYIQ5T013 277 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 SYCE2Q6PIF2 218 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 BRAPQ7Z569 592 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 DAW1Q8N136 415 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 GSTCDQ8NEC7 633 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 SUSD6Q92537 303 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 RUSC1Q9BVN2 902 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 STK39Q9UEW8 545 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 USP20Q9Y2K6 914 aa20.88■□□□□ 0.93
COL5A1-203ENST00000460264 PRG3Q9Y2Y8 225 aaPredicted RBP20.88■□□□□ 0.93
COL5A1-203ENST00000460264 PTPN14Q15678 1187 aa20.87■□□□□ 0.93
COL5A1-203ENST00000460264 TMEM132AQ24JP5 1023 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms