RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TMEM192Q8IY95 271 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 TRIM63Q969Q1 353 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SKA1Q96BD8 255 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZNF837Q96EG3 531 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 FAXDC2Q96IV6 333 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 ORAI3Q9BRQ5 295 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 LACRTQ9GZZ8 138 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 KLHL25Q9H0H3 589 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 SMG9Q9H0W8 520 aaKnown RBP5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 VEZTQ9HBM0 779 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 CACNA2D2Q9NY47 1150 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 PGAP2Q9UHJ9 254 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 AKT3Q9Y243 479 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 DGKBQ9Y6T7 804 aa5.88□□□□□ -1.47
HMGB1P4-201ENST00000455362 MYH6P13533 1939 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 TCHHQ07283 1943 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 IGKV6D-41A0A0C4DH26 115 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 XPOTO43592 962 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 JAK2O60674 1132 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CTNND1O60716 968 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CLEC3AO75596 197 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 RNASEH2AO75792 299 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CRTAMO95727 393 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CYP11A1P05108 521 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 BMP4P12644 408 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 AKR1B1P15121 316 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 SYT1P21579 422 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 GJB2P29033 226 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 GBP1P32455 592 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 GRIK1P39086 918 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 KCNJ6P48051 423 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 IREB2P48200 963 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 LSSP48449 732 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 METAP2P50579 478 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 RCAN1P53805 252 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 NUCB2P80303 420 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 GSTM4Q03013 218 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 TROAPQ12815 778 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 PKP1Q13835 747 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 PPP2R5BQ15173 497 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 NTRK3Q16288 839 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 LONRF1Q17RB8 773 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 KIF4BQ2VIQ3 1234 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 INAVAQ3KP66 663 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 IFIT1BQ5T764 474 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 MICU3Q86XE3 530 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 SMC1BQ8NDV3 1235 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 NSUN7Q8NE18 718 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 C1orf162Q8NEQ5 155 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 POF1BQ8WVV4 589 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 BTN2A2Q8WVV5 523 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 ATXN2LQ8WWM7 1075 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC17Q96LX7 622 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CORO1BQ9BR76 489 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 TMEM39BQ9GZU3 492 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 DNAJC18Q9H819 358 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 CABP5Q9NP86 173 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 MTMR4Q9NYA4 1195 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 HACL1Q9UJ83 578 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 SLC6A14Q9UN76 642 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZDHHC9Q9Y397 364 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 ASTN2O75129 1339 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 NID2Q14112 1375 aa5.87□□□□□ -1.47
HMGB1P4-201ENST00000455362 GREB1LQ9C091 1923 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 MYH4Q9Y623 1939 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 PLIN4Q96Q06 1357 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC196A0A1B0GTZ2 297 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 PTPDC1A2A3K4 754 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 GOLGA8AA7E2F4 631 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 C9IYK1 514 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 H3BRJ5 948 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 AQP7O14520 342 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 TERTO14746 1132 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CPLX1O14810 134 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 AP1G1O43747 822 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CALM1P0DP23 149 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CALM2P0DP24 149 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CALM3P0DP25 149 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 RBP3P10745 1247 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 TOP1P11387 765 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 FDPSP14324 419 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 IFNAR1P17181 557 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 NAT1P18440 290 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 RXRAP19793 462 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 PDCP20941 246 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 SESN3P58005 492 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 JAG1P78504 1218 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms