RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ATXN1P54253 815 aaKnown RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 GPC5P78333 572 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 DSC1Q08554 894 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 ZNF528Q3MIS6 628 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 ADCK5Q3MIX3 580 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 LILRA6Q6PI73 481 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 ANO5Q75V66 913 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 DHX32Q7L7V1 743 aaKnown RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 PALB2Q86YC2 1186 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 SMG8Q8ND04 991 aaKnown RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 FGF14Q92915 247 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 FAM193BQ96PV7 902 aaPredicted RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 TEKT3Q9BXF9 490 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 CHST7Q9NS84 486 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 DPP7Q9UHL4 492 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 MTF2Q9Y483 593 aaPredicted RBP19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 CHD6Q8TD26 2715 aa19.29■□□□□ 0.68
UBE2D4-209ENST00000454428 USP24Q9UPU5 2620 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 TDRD15B5MCY1 1934 aaKnown RBP19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 VARS2Q5ST30 1063 aaKnown RBP19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 MIER3Q7Z3K6 550 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 RDM1Q8NG50 284 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 PRKD2Q9BZL6 878 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 RNF39Q9H2S5 420 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 MIOSQ9NXC5 875 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 ZDHHC7Q9NXF8 308 aa19.28■□□□□ 0.68
UBE2D4-209ENST00000454428 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 C1RP00736 705 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 TGM1P22735 817 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 GNA11P29992 359 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 OR1G1P47890 313 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 RCAN1P53805 252 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 SNW1Q13573 536 aaKnown RBP19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 PLA2G4FQ68DD2 849 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 PARM1Q6UWI2 310 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 FBXO4Q9UKT5 387 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 COL4A3BPQ9Y5P4 624 aa19.27■□□□□ 0.68
UBE2D4-209ENST00000454428 KANSL1LA0AUZ9 987 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 SPTLC1O15269 473 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 USP11P51784 963 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 ELMSAN1Q6PJG2 1045 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 CCDC12Q8WUD4 166 aaPredicted RBP19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 NELL1Q92832 810 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 GPR62Q9BZJ7 368 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 PIDD1Q9HB75 910 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 ANO2Q9NQ90 1003 aa19.26■□□□□ 0.67
UBE2D4-209ENST00000454428 NID2Q14112 1375 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 ARL5CA6NH57 179 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 PRPF3O43395 683 aaKnown RBP19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 RPL17P18621 184 aaKnown RBP19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 NPEPPSP55786 919 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 Q4G0T1 1027 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 GLYCTKQ8IVS8 523 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 ZBTB44Q8NCP5 570 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 ZFP42Q96MM3 310 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 MBOAT7Q96N66 472 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 GAD1Q99259 594 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 EIF2AQ9BY44 585 aaKnown RBP19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 SPATA6Q9NWH7 488 aaPredicted RBP19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 NCDNQ9UBB6 729 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 IPPQ9Y573 584 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 NOTCH4Q99466 2003 aa19.25■□□□□ 0.67
UBE2D4-209ENST00000454428 LILRB5O75023 590 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 ZMYND10O75800 440 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 TDP2O95551 362 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 FSHRP23945 695 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 MLH1P40692 756 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 SCNN1GP51170 649 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 NTHL1P78549 312 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 CSTF1Q05048 431 aaKnown RBP19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 TSGA10IPQ3SY00 556 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 ETNPPLQ8TBG4 499 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 PRPF31Q8WWY3 499 aaKnown RBP19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 PHKBQ93100 1093 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 SHDQ96IW2 340 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 WRAP73Q9P2S5 460 aaPredicted RBP19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 HES2Q9Y543 173 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 PCDHGA2Q9Y5H1 932 aa19.24■□□□□ 0.67
UBE2D4-209ENST00000454428 CYP3A7-CYP3A51PA0A087WV96 503 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 EML1O00423 815 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 LAMTOR5O43504 91 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 SRGAP2CP0DJJ0 459 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 ITGA4P13612 1032 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 CYP3A7P24462 503 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 MLF2Q15773 248 aaPredicted RBP19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 NTRK3Q16288 839 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 GRASPQ7Z6J2 395 aaPredicted RBP19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 GSTCDQ8NEC7 633 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 BICD2Q8TD16 824 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 TBCKQ8TEA7 893 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 TMEM143Q96AN5 459 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 BORCS6Q96GS4 357 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms