RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
BRCC3-208ENST00000453705 ZKSCAN5Q9Y2L8 839 aa8.49□□□□□ -1.05
BRCC3-208ENST00000453705 SLC4A4Q9Y6R1 1079 aa8.49□□□□□ -1.05
BRCC3-208ENST00000453705 KLF18A0A0U1RQI7 1052 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 TULP2O00295 520 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 PLOD2O00469 737 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 JAK2O60674 1132 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 GJB3O75712 270 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CAVIN2O95810 425 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CALM1P0DP23 149 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CALM2P0DP24 149 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CALM3P0DP25 149 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CKMT1AP12532 417 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 NPR1P16066 1061 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF24P17028 368 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 MX2P20592 715 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 ZNF460Q14592 562 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 SLC10A6Q3KNW5 377 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 STYK1Q6J9G0 422 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 KDELC1Q6UW63 502 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 ADGRA1Q86SQ6 560 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 TMTC1Q8IUR5 882 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 FBXO18Q8NFZ0 1043 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CEP295NLQ96MC4 621 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC68Q9H2F9 335 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 AGTPBP1Q9UPW5 1226 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 GOLGB1Q14789 3259 aaKnown RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 ZSCAN5CA6NGD5 496 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 BIN1O00499 593 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CTNND1O60716 968 aaKnown RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 COBLO75128 1261 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 SOCS5O75159 536 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 UBXN1Q04323 297 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 DNM1Q05193 864 aaKnown RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 GABPB1Q06547 395 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 PRKG1Q13976 671 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 YOD1Q5VVQ6 348 aaPredicted RBP8.48□□□□□ -1.05
BRCC3-208ENST00000453705 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 TTC6Q86TZ1 520 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 CHST13Q8NET6 341 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 COG8Q96MW5 612 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 PSD3Q9NYI0 1048 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 POLHQ9Y253 713 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
BRCC3-208ENST00000453705 SLX4Q8IY92 1834 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 DKC1O60832 514 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 KINO60870 393 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CLASP2O75122 1294 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 FBXO24O75426 580 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 MMP10P09238 476 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 PLCG2P16885 1265 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 U2AF2P26368 475 aaKnown RBP eCLIP8.47□□□□□ -1.051e-9■■■□□ 15.6
BRCC3-208ENST00000453705 ATP1A2P50993 1020 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ARFIP1P53367 373 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TGFB2P61812 414 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CENPCQ03188 943 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ARHGAP11AQ6P4F7 1023 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 C7orf57Q8NEG2 295 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ESR2Q92731 530 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TAOK3Q9H2K8 898 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 GPR75-ASB3A0A0A6YYF3 556 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 GOLGA8BA8MQT2 603 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 LACTBL1A8MY62 500 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ADCY3O60266 1144 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TMEM11P17152 192 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 RHCEP18577 417 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 GRK6P43250 576 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ATP5OP48047 213 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CBX1P83916 185 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 RHDQ02161 417 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 PSMD6Q15008 389 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 OASLQ15646 514 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CAVIN1Q6NZI2 390 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 LPCAT2Q7L5N7 544 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC65Q8IXS2 484 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 Q8NFD4 153 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 NT5C1BQ96P26 610 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 PPP1R16BQ96T49 567 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 COA1Q9GZY4 146 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 SENP2Q9HC62 589 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 AASSQ9UDR5 926 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ZC3H7BQ9UGR2 993 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 MAPRE3Q9UPY8 281 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 B4E171 279 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 KPNA6O60684 536 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ADCY5O95622 1261 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 METAP2P50579 478 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 DCAF7P61962 342 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 FUT2Q10981 343 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 NAA25Q14CX7 972 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms