RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 BICD1Q96G01 975 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 PRDM12Q9H4Q4 367 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 GIT1Q9Y2X7 761 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 K7ENM7 598 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 TRAK2O60296 914 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 IGFBP4P22692 258 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 CMA1P23946 247 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
LTBR-204ENST00000444814 ZNF131P52739 623 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 YARSP54577 528 aaKnown RBP13.46□□□□□ -0.25
LTBR-204ENST00000444814 GIT2Q14161 759 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 EPC2Q52LR7 807 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 NOMO2Q5JPE7 1267 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
LTBR-204ENST00000444814 CRIPAKQ8N1N5 446 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 DDX12PQ92771 950 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 P2RX5Q93086 422 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
LTBR-204ENST00000444814 DHX58Q96C10 678 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 HVCN1Q96D96 273 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 CPB2Q96IY4 423 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 CCDC113Q9H0I3 377 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 ARHGAP28Q9P2N2 729 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.25
LTBR-204ENST00000444814 KCNH3Q9ULD8 1083 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 EXOC7Q9UPT5 735 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 TNFSF13BQ9Y275 285 aa13.46□□□□□ -0.25
LTBR-204ENST00000444814 C5orf67F2Z3F1 127 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 SLC16A4O15374 487 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 NPTXRO95502 500 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 FGFR1P11362 822 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 IDEP14735 1019 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 KRT17Q04695 432 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 UBE3AQ05086 875 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MAPK7Q13164 816 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 GPM6BQ13491 265 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 AMHR2Q16671 573 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ZPBP2Q6X784 338 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ZNF598Q86UK7 904 aaKnown RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 HELQQ8TDG4 1101 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 KCNN1Q92952 543 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 CCDC94Q9BW85 323 aaPredicted RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 PANK2Q9BZ23 570 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 TOPORSQ9NS56 1045 aaPredicted RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 IPPQ9Y573 584 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 TTC3P53804 2025 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 A0A1W2PQ27 194 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 A0A1W2PQ64 194 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 A0A1W2PQD8 194 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 H3BNC9 293 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 LPXNO60711 386 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MYL1P05976 194 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MATR3P43243 847 aaKnown RBP eCLIP13.45□□□□□ -0.26
LTBR-204ENST00000444814 LIG4P49917 911 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 NCKAP1LP55160 1127 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 TIGD5Q53EQ6 642 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 AXDND1Q5T1B0 1012 aaPredicted RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 DYMQ7RTS9 669 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 HAUS6Q7Z4H7 955 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 DAW1Q8N136 415 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MYLIPQ8WY64 445 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 CASD1Q96PB1 797 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 INPP5FQ9Y2H2 1132 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 PCDHB13Q9Y5F0 798 aa13.45□□□□□ -0.26
LTBR-204ENST00000444814 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
LTBR-204ENST00000444814 TOM1L1O75674 476 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 MCF2P10911 925 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 POU3F3P20264 500 aaPredicted RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 SLFN12LQ6IEE8 588 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 KANK3Q6NY19 840 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
LTBR-204ENST00000444814 MRPS27Q92552 414 aaKnown RBP13.44□□□□□ -0.26
LTBR-204ENST00000444814 GUCD1Q96NT3 240 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms