RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 NPTXRO95502 500 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 EYA4O95677 639 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 GLP2RO95838 553 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 GALTP07902 379 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 LIG1P18858 919 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 PDCP20941 246 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 MLH1P40692 756 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 SLC11A1P49279 550 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 PRPF4BQ13523 1007 aaKnown RBP19.43■□□□□ 0.7
NUP50-208ENST00000430547 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 CDR2LQ86X02 465 aaPredicted RBP19.43■□□□□ 0.7
NUP50-208ENST00000430547 ZNF280BQ86YH2 543 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 VPS52Q8N1B4 723 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 BSNDQ8WZ55 320 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 IGSF21Q96ID5 467 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 CDK5RAP3Q96JB5 506 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 NXF3Q9H4D5 531 aaKnown RBP19.43■□□□□ 0.7
NUP50-208ENST00000430547 STK39Q9UEW8 545 aa19.43■□□□□ 0.7
NUP50-208ENST00000430547 A0A1B0GUA9 196 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 ARL5CA6NH57 179 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 HIDE1A8MVS5 230 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 E9PMD0 336 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 N4BP3O15049 544 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 ALDH2P05091 517 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 PRKCBP05771 671 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 CDC25AP30304 524 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 CUL4AQ13619 759 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 SMAD2Q15796 467 aaKnown RBP19.42■□□□□ 0.7
NUP50-208ENST00000430547 IL17AQ16552 155 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 FAM187BQ17R55 369 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 ARL6IP4Q66PJ3 421 aaKnown RBP19.42■□□□□ 0.7
NUP50-208ENST00000430547 DDX53Q86TM3 631 aaKnown RBP19.42■□□□□ 0.7
NUP50-208ENST00000430547 TMEM173Q86WV6 379 aaPredicted RBP19.42■□□□□ 0.7
NUP50-208ENST00000430547 MSLNLQ96KJ4 702 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 GAD1Q99259 594 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 POP1Q99575 1024 aaKnown RBP19.42■□□□□ 0.7
NUP50-208ENST00000430547 ADPGKQ9BRR6 497 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 TMEM175Q9BSA9 504 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 NT5C3AQ9H0P0 336 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 CLEC1BQ9P126 229 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 FAN1Q9Y2M0 1017 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 GIT1Q9Y2X7 761 aa19.42■□□□□ 0.7
NUP50-208ENST00000430547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.41■□□□□ 0.7
NUP50-208ENST00000430547 NR1I2O75469 434 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 DDHD2O94830 711 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 CXCL14O95715 111 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 BMP15O95972 392 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 AFF1P51825 1210 aaKnown RBP19.41■□□□□ 0.7
NUP50-208ENST00000430547 EFNA5P52803 228 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 COASYQ13057 564 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 GIT2Q14161 759 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 ADHFE1Q8IWW8 467 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 MRPL43Q8N983 215 aaKnown RBP19.41■□□□□ 0.7
NUP50-208ENST00000430547 SMRP1Q8NCR6 262 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 RPS6KC1Q96S38 1066 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 ZBP1Q9H171 429 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 FZD8Q9H461 694 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 PARP2Q9UGN5 583 aa19.41■□□□□ 0.7
NUP50-208ENST00000430547 C5orf42Q9H799 3197 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 C2orf71A6NGG8 1288 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 SSBP05455 408 aaKnown RBP eCLIP19.4■□□□□ 0.7
NUP50-208ENST00000430547 AKAP5P24588 427 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 OR1G1P47890 313 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 SCNN1GP51170 649 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 DRC1Q96MC2 740 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 C1QTNF1Q9BXJ1 281 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 POLD4Q9HCU8 107 aa19.4■□□□□ 0.7
NUP50-208ENST00000430547 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 ACKR2O00590 384 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 NRP1O14786 923 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 INPPL1O15357 1258 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 B4GALT3O60512 393 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 CTSAP10619 480 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 RBM10P98175 930 aaKnown RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 ZP2Q05996 745 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 DMP1Q13316 513 aaPredicted RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 KCTD17Q8N5Z5 321 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 VN1R2Q8NFZ6 395 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 BCL7CQ8WUZ0 217 aaPredicted RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 CASP10Q92851 521 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 MMTAG2Q9BU76 263 aaKnown RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 KIFC3Q9BVG8 833 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 PDZD7Q9H5P4 517 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 CD320Q9NPF0 282 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 PRG3Q9Y2Y8 225 aaPredicted RBP19.39■□□□□ 0.69
NUP50-208ENST00000430547 ZMYM2Q9UBW7 1377 aa19.39■□□□□ 0.69
NUP50-208ENST00000430547 K7ERI5 159 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 HIP1RO75146 1068 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 PEX3P56589 373 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 RINT1Q6NUQ1 792 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 COLGALT2Q8IYK4 626 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 AUTS2Q8WXX7 1259 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 AK8Q96MA6 479 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 TIPINQ9BVW5 301 aa19.38■□□□□ 0.69
NUP50-208ENST00000430547 KLK14Q9P0G3 267 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms