RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TUFT1Q9NNX1 390 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 UBN1Q9NPG3 1134 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 HCFC2Q9Y5Z7 792 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 IRAK3Q9Y616 596 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 TSPAN1O60635 241 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 CTSAP10619 480 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 ITGA4P13612 1032 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 GLRA2P23416 452 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 PLA2G5P39877 138 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 SLC11A1P49279 550 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 AFF1P51825 1210 aaKnown RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 MBTD1Q05BQ5 628 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 ORC2Q13416 577 aaPredicted RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 CAPSQ13938 189 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 ZNF174Q15697 407 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 CATSPER3Q86XQ3 398 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 TMEM87AQ8NBN3 555 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 SMG8Q8ND04 991 aaKnown RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 BCL7CQ8WUZ0 217 aaPredicted RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 AUTS2Q8WXX7 1259 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 EDAQ92838 391 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 CPB2Q96IY4 423 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 RPGRIP1Q96KN7 1286 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 TMEM175Q9BSA9 504 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 NFKBIZQ9BYH8 718 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 CSRNP2Q9H175 543 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 SH2B1Q9NRF2 756 aaPredicted RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 STK39Q9UEW8 545 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
NUP50-205ENST00000419387 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 IPPQ9Y573 584 aa10.48□□□□□ -0.73
NUP50-205ENST00000419387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 NRP1O14786 923 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 B4GALT3O60512 393 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 MED24O75448 989 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 POMCP01189 267 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 OR52Z1P0C646 297 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 ARF4P18085 180 aaPredicted RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 ITIH3Q06033 890 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 GNL2Q13823 731 aaKnown RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 AMHR2Q16671 573 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 ERMNQ8TAM6 284 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 NACC1Q96RE7 527 aa10.47□□□□□ -0.73
NUP50-205ENST00000419387 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
NUP50-205ENST00000419387 ARL5CA6NH57 179 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 INPPL1O15357 1258 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 MUTP22033 750 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 RPA1P27694 616 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 TRAPPC10P48553 1259 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 PTPN14Q15678 1187 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 TTC38Q5R3I4 469 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 CES5AQ6NT32 575 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 NOSTRINQ8IVI9 506 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 COLGALT2Q8IYK4 626 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 GAD1Q99259 594 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 VN1R3Q9BXE9 311 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 TRIM6Q9C030 488 aaPredicted RBP10.46□□□□□ -0.73
NUP50-205ENST00000419387 ADAM7Q9H2U9 754 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 MIOSQ9NXC5 875 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 GIT1Q9Y2X7 761 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 HES2Q9Y543 173 aa10.46□□□□□ -0.73
NUP50-205ENST00000419387 ARID2Q68CP9 1835 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 A0A1B0GUA9 196 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 B4GALT5O43286 388 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 LILRB3O75022 631 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
NUP50-205ENST00000419387 EPCAMP16422 314 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 U2AF2P26368 475 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUP50-205ENST00000419387 MLH1P40692 756 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 MTHFRP42898 656 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 OR1G1P47890 313 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 SCNN1GP51170 649 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 ZXDAP98168 799 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 PADI6Q6TGC4 694 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 TRIM67Q6ZTA4 783 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
NUP50-205ENST00000419387 C4orf32Q8N8J7 132 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms